FFCP PHASE1:Hg19::chr10:20017465..20017494,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000423551,ENST00000431157,ENST00000451713,uc001iqf.2_5end | |||
|coexpression_cluster_id=C975 | |||
|description=CAGE_peak_2_at_ENST00000423551_5end,CAGE_peak_2_at_ENST00000431157_5end,CAGE_peak_2_at_ENST00000451713_5end,CAGE_peak_2_at_uc001iqf.2_5end | |||
|id=chr10:20017465..20017494,- | |||
|ontology_enrichment_celltype=CL:0002274!1.43e-17!5;CL:0000457!1.43e-17!5;CL:0002191!1.43e-17!5;CL:0000097!1.43e-17!5;CL:0000831!1.43e-17!5;CL:0002028!1.43e-17!5;CL:0000763!1.31e-11!112;CL:0000049!1.31e-11!112;CL:0000163!1.47e-09!9;CL:0000037!1.53e-07!172;CL:0000566!1.53e-07!172;CL:0000764!4.02e-07!2;CL:0000765!4.02e-07!2;CL:0000050!4.02e-07!2;CL:0000038!4.02e-07!2;CL:0000558!4.02e-07!2;CL:0000547!4.02e-07!2;CL:0000549!4.02e-07!2;CL:0000550!4.02e-07!2;CL:0000552!4.02e-07!2;CL:0000988!8.86e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.78e-36;5!CL:0000163;5.56e-20;9!CL:0000763;1.96e-09;100!CL:0000037;3.21e-08;1!CL:0001024;3.21e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.62e-36,5;CL:0002028,4.62e-36,5;CL:0000163,5.45e-20,9;CL:0000763,2.09e-19,108;CL:0000049,2.09e-19,108;CL:0000037,1.24e-12,168;CL:0002032,7.70e-12,161;CL:0000837,7.70e-12,161;CL:0000988,8.53e-12,177;CL:0001024,3.10e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!7.52e-18!31;DOID:1240!1.83e-13!39;DOID:2531!1.70e-09!51;DOID:0060083!1.70e-09!51;DOID:1036!6.40e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.66e-33;31!DOID:1240;6.39e-22;39!DOID:2531;8.45e-15;51!DOID:0060083;8.45e-15;51!DOID:1036;3.82e-14;8!DOID:9119;3.70e-08;1!DOID:8552;3.70e-08;1!DOID:5662;6.03e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.03e-35,31;DOID:1240,1.61e-27,39;DOID:2531,1.79e-20,51;DOID:0060083,1.79e-20,51;DOID:1036,3.56e-14,8;DOID:8552,3.57e-08,1;DOID:9119,3.83e-08,1;DOID:5662,6.24e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.66e-19!15;UBERON:0000179!6.66e-19!15;UBERON:0000463!6.66e-19!15;UBERON:0007023!4.93e-10!115;UBERON:0002390!3.59e-08!102;UBERON:0003061!3.59e-08!102;UBERON:0002193!6.92e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.75e-11;15!UBERON:0000179;5.75e-11;15!UBERON:0000463;5.75e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.69e-11,15;UBERON:0000179,5.69e-11,15;UBERON:0000463,5.69e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,6.75281010470149,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.0079720021272,30.8279709639845,12.9058201539788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.7736605516984,50.8919948596447,24.0500614027296,31.5622697983146,18.4313952802515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.476463550915578,2.05681136543097,0.648473311192717,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,8.98107171447675,2.10655907145603,0,0.649243880549111,11.7934814807653,0,0,12.5317238545034,0,0,0,0,0,0,0,0,0,6.12493582569533,0,32.725137095594,4.66300755196948,12.6888304579065,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,31.0820907662149,4.98635045700469,0,0,0,1.89753732724185,7.15214605411704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,13.5452659236409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20041606606193,0,0,0,0,0.39246546425257,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0.342233301085281,0.336760265072938,0,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0,0 | |||
|short_description=p2@ENST00000423551,p2@ENST00000431157,p2@ENST00000451713,p2@uc001iqf.2 | |||
}} |
Revision as of 02:03, 11 January 2014
Short description: | p2@ENST00000423551, p2@ENST00000431157, p2@ENST00000451713, p2@uc001iqf.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000423551_5end, CAGE_peak_2_at_ENST00000431157_5end, CAGE_peak_2_at_ENST00000451713_5end, CAGE_peak_2_at_uc001iqf.2_5end |
Coexpression cluster: | C975_Mast_chronic_CD34_acute_leukemia_CD133_Whole |
Association with transcript: | 0bp_to_ENST00000423551, ENST00000431157, ENST00000451713, uc001iqf.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.62e-36 | 5 |
basophil mast progenitor cell | 4.62e-36 | 5 |
endocrine cell | 5.45e-20 | 9 |
myeloid cell | 2.09e-19 | 108 |
common myeloid progenitor | 2.09e-19 | 108 |
hematopoietic stem cell | 1.24e-12 | 168 |
hematopoietic oligopotent progenitor cell | 7.70e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.70e-12 | 161 |
hematopoietic cell | 8.53e-12 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 5.69e-11 | 15 |
haemolymphatic fluid | 5.69e-11 | 15 |
organism substance | 5.69e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.03e-35 | 31 |
leukemia | 1.61e-27 | 39 |
hematologic cancer | 1.79e-20 | 51 |
immune system cancer | 1.79e-20 | 51 |
chronic leukemia | 3.56e-14 | 8 |
chronic myeloid leukemia | 3.57e-08 | 1 |
acute myeloid leukemia | 3.83e-08 | 1 |
pleomorphic carcinoma | 6.24e-08 | 1 |