FFCP PHASE1:Hg19::chr10:33221480..33221527,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=117bp_to_ENST00000464001_5end | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_7_at_ITGB1_5end | |||
|id=chr10:33221480..33221527,- | |||
|ontology_enrichment_celltype=CL:0000055!1.73e-12!180;CL:0000057!1.96e-11!75;CL:0000222!8.49e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.86e-07;12!CL:0000077;4.12e-07;19!CL:0000134;9.28e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.91e-14,76;CL:0000680,8.25e-08,58;CL:0000056,8.25e-08,58;CL:0000355,8.25e-08,58;CL:0000222,2.11e-07,121;CL:0002334,2.69e-07,12;CL:0000187,6.12e-07,55;CL:0000077,6.83e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.03e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.76e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.64e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.66e-08!83;UBERON:0002329!9.66e-08!83;UBERON:0003077!9.66e-08!83;UBERON:0003059!9.66e-08!83;UBERON:0007282!9.66e-08!83;UBERON:0009618!9.66e-08!83;UBERON:0007285!9.66e-08!83;UBERON:0003102!2.16e-07!95;UBERON:0000486!3.57e-07!82;UBERON:0004290!7.39e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.46e-08,99;UBERON:0000486,1.38e-07,83;UBERON:0007524,1.91e-07,73;UBERON:0001134,1.98e-07,62;UBERON:0002036,1.98e-07,62;UBERON:0003082,1.98e-07,62;UBERON:0002329,2.18e-07,71;UBERON:0003059,2.18e-07,71;UBERON:0007282,2.18e-07,71;UBERON:0004290,2.18e-07,71;UBERON:0009618,2.18e-07,71;UBERON:0002385,3.43e-07,64;UBERON:0001015,3.43e-07,64;UBERON:0000383,3.43e-07,64;UBERON:0003077,4.55e-07,72;UBERON:0007285,4.55e-07,72 | |||
|phase1_expression=4.36028110249336,7.49351833618441,3.24195129420734,8.00586386825043,3.5756887554183,6.97870819280295,0,0,1.30592814099919,0.491467873003018,0.697801167972428,0,0.527533956456907,0.990130823680373,3.31397375727916,8.74022690387308,7.8350288643117,4.38186054232424,7.3189919818576,0,0.408001382488506,0.313454721478088,0,1.91624195102038,1.50651167513763,0,0.0821005894499457,0,0,0.383829398097213,0.464448369948228,1.83884244895785,0,1.10926203050036,0.232401601740905,0.426507697462265,0,0.553995408531877,0.802177789880567,0.217010870715852,0.223915474239924,0.647787332037959,0.515151135268373,0.726991193897824,1.13362783106643,1.69808842831471,2.09186133215116,2.87817521615278,1.85823822537062,1.7261543539329,0.512321413058201,0.945928919554341,1.72372840368309,1.93645405075148,0,1.88242339542605,0.818718450173537,1.12361742222542,2.14258724659632,0.641858054152187,0.639337125799041,0,1.39624560335142,0.852449501065388,4.64334781805734,6.24123747160254,3.11411124497787,2.26123798731069,2.08593167368081,0.65156653411535,3.63239701580021,1.10483290796269,0.632924774881769,0.633765858935825,0.637812899895131,0.628975936525128,0.561643155732475,0.150176892841506,0.48217676009124,0,0,0.365328307529268,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0.786021525498329,1.02800749499755,0,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0.766440987203842,0.34362744548263,1.26509846009751,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.383959833463255,2.49861453104692,0,0,0.604820229674197,1.60464117470104,0,21.9426179682566,4.69490601792545,1.02290049474824,1.0843174571537,1.50401373190767,2.75208386025565,1.5905718941022,6.8128881842369,0.472674085820339,1.77383517970051,2.0202000709419,0.196468613246569,0.364295288292542,0,0.324547393654683,0.696518949197069,1.46253756570752,0.238490624305342,0,0,0.39752481473341,0,1.73570250803797,0.56530794192401,0.419499436209906,1.92582629358047,1.04497483268405,1.8089173141853,1.06729878806013,3.68192674041137,0.402829317109147,0.760272105718513,1.70843440283719,0.367663080345869,0,0.714397826272638,0.673588117878509,1.68917220724983,0,0,0.916008719652036,0,0,0,12.424298792383,2.65924074495618,3.17782033951725,11.7603014507014,4.965357350777,1.68203280042692,0,2.96001058100592,0.933633106199299,2.15537075311501,1.9615428373615,0.151357427644931,2.88087962239999,0.234321431833797,1.5608003841516,0,3.43731965269142,0.822041490506354,1.29498355494505,0.98315564691574,1.22492502752936,1.35117749042945,1.54988671763648,3.56400857184616,6.42894016124248,0,0,1.34668891163253,1.7516592782075,1.93944880838928,2.19488810440419,3.0648779579902,3.45547535485173,1.81491493056034,5.02290979928813,5.12537733164562,7.84148034290379,7.50227740211006,3.60683852334536,3.60696756063881,4.65292140828975,8.77636927654584,3.11798416515836,3.78650661366172,3.58994604704967,2.42469085228218,9.58525899794859,1.71278566986988,2.20428770003634,1.73934767846967,3.54569956768085,2.00763216772303,0.487894824518382,0.530119073285941,0.69716365721711,0.932949495138334,0.756962552626885,0,1.56449532329816,11.5783368874719,1.38134921352481,2.78620756819187,0.721879481669586,1.8929088006375,1.85443159085912,1.44606617930089,0.882351781859152,1.08939722046203,1.89816495288877,3.23595139584395,1.96221465125346,3.07797725557112,0,0,0.4115740113314,0,0,2.94848165003288,1.77236972004421,1.32438929824395,0.245976877086227,2.91665277507493,1.20725313949488,0,4.2222168412885,2.40729957412177,0.325808305310325,1.03993478527958,5.77325368101093,1.15930404975077,3.40485213283883,1.15493158208859,1.85194205030644,4.37584550139576,0,0,0.738651018262192,1.40402559083543,1.18904929830983,0,3.35964256397719,1.70130116690864,1.97028749946266,2.3250715081117,3.06706143332169,0,0.528290604079356,0.207328115540772,0.144119953416961,0,0.380987365753014,0.381988425558278,0,0,0.822619941626588,2.10240140490742,0.571652865261156,0.112131084345361,0.43596006883328,1.7601188597028,2.97324946242889,0,0,5.31876233169741,4.16029747645464,0.257207374262142,0,0,4.00338382242813,0,0.823240336780769,2.60588947434988,2.13235169245527,0.791951872933429,5.12446941001296,4.35766729300147,11.7968129594827,1.2162378064119,1.50677127429638,10.5416969741516,2.39624855491583,1.14861935834114,1.42636905040718,5.50168965336801,2.87666851570537,2.32779252211864,0.560425719967636,0.394061520403854,1.50939302401662,0.513372145118994,0.508189248444927,0,2.31986643833309,0.167516265334349,0.637938751653163,0.749007023947182,0,0,1.71768088406796,0.500170521059677,1.35632511849868,6.86303843051664,12.133171238207,3.94256037584837,7.49705055953364,0.601892199455438,0,2.0694614258501,3.32112799267718,2.02806085395873,2.78027566297865,0.195801157462741,0,0,0.215714200818617,0.533637789017222,0.303127571446259,3.32870879020994,0.30239029332968,3.96972492510043,3.52962538562544,5.3325417942284,3.33161788064823,5.11707249066703,9.16867350518563,4.45254199334973,3.70103265126373,4.97172830876756,3.28508624055237,7.2695620085707,2.20799719073923,0.362578348774867,3.80962293576241,6.99815515912812,1.83703117063371,2.36718518408732,4.06485686374215,0,5.2370429231002,0.784349769176855,0,5.17202981575091,0,0.340187410553031,12.7390390500262,4.62681758070868,0,0,0.509752546090077,0,0.671624264166535,0.438519753291869,0,0.769350375349168,0,0.650756789328606,1.03041011647722,0.824125183365091,0.330037999682352,0,1.30012049207304,4.82051789532479,0.676695028044854,1.23238893691716,1.07452572308291,1.24052915236078,1.50388342815583,3.0453505721988,2.13066568540252,1.4245125703478,3.30569830721956,4.99694175149276,2.55225424989168,3.0347334256665,2.78907329578371,15.1109926478707,0.6970372701606,1.23213432070436,1.59691809095107,2.60979897622522,3.33583594387056,2.57624796135584,1.48863347743867,1.89827654831236,3.43134349062885,0,11.1264136888819,1.27281299170375,3.13979456079692,1.79872457583315,1.64722217841633,2.70968525395079,1.01091240786658,3.17020642346017,2.94880919367287,0,5.11798328225697,0,1.77449884830381,3.95935209470396,1.13008116620243,1.65409603063837,2.65375590096488,2.19225442626881,0,3.27947376023316,0.608731130888112,2.78841148289775,0.563391205064483,1.57752487424457,1.08073945114433,0.7133421029625,2.83808851256478,5.06658324714394,2.63435914367922,0,0.349934720244983,1.34710957815717,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0.886860307073351,1.83778720165568,0.507447609232169,0,1.13929437434833,0.238231775457789,0.822724546172388,1.29694662238543,0.540031437238115,1.58625035258854,0.854592569019785,4.81239927631679,1.22520107990516,0.557409525377156,0.432807638929335,0,0.159426272728822,0.399158742865633,0.191505370132367,1.2700414963433,0.649243880549111,1.96558024679421,0,0.47003968731907,0,0.677167111206413,0.321176150207399,0,0,1.37402137902306,0.614481528616916,0.223676107892416,0,0.19538809540204,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0.37428108081644,0.73254089635947,1.21360521749513,1.67165076416218,1.70481688083848,1.19372242368845,0.890894042497916,1.53580351049616,0.994147647766298,0.562677665642051,2.11486539543521,0,0.63337622438398,4.38345574152353,0.276283915531148,0.251932747854276,0.409074730008619,0,6.53183134089796,0.629078458031288,1.43216939740487,1.02314474045374,2.26879832964947,0,1.11136990144637,0.969332746095218,0.278304294485554,0,0.260427761085233,0.0874599999961957,2.17499872630438,1.70690172428249,0.254253650292766,0.709163045303809,0.344743373241465,1.45802306691627,0.868124974666461,0,0,0,0.110579259931225,0,0.219385397153973,0.32681539055697,0.697118721393016,0.923403102045565,1.13942055847001,0.23056390438806,0.359030577639089,1.19512109114209,1.27600463892768,1.92354946143911,5.33034776018635,0,0,0.498635045700469,0,0.19606253431774,0,0,0.317873157960757,3.79796516150449,0.979396848954886,0.848118428603645,0,1.99052386215701,0.353830258013357,2.4441205797345,0.593042257361244,0.247127877893006,0.104421949505455,0.269604531922708,0.802577647298789,0.234264445725339,0.729819156862664,0.391329237864179,3.15614493394321,1.97292201424695,1.20990716048664,0.61214552326098,0.189559738885464,0.60129367765797,0.207376382794494,0,1.323967823502,1.2557316736289,0,0.569219092059585,4.99228822847299,0.520679215005393,0.195984794828755,0.522355239482415,1.22308667769421,4.64362287673365,0.483781656445426,0.511625219603299,0.739039113478883,0.969890164884194,0.264768380074501,0,3.15196426687527,1.58971689362392,0,1.56441106187842,1.44285876452761,0.426905989478705,3.19695375331408,1.15272333723285,0.572682980829578,0.686379991447858,0.576219191952599,0.621262677827163,1.88555227693436,1.9026588850306,1.04602846312333,1.01998217636322,1.73370353940911,0,1.23214841002794,0,6.0167161798794,0,3.0721064139948,2.29160424011684,2.87149209830726,1.39775300349294,3.43380838509257,1.11585728720936,0.470284307407084,11.5295962733569,0,0.630265458457789,0.329663433524666,0.539228350833479,1.08270229666224,0.0846733320657845,0.795229689809303,0.681017030557878,0.643012593860077,0.550157746388935,0.83088067605837,0.449947783103001,0,0.0607495566580247,1.34173875039706,0.630445658393585,0.104909176269996,0.633602019116439,1.25501137532991,0.575745591958336,4.2881719582402,2.64836788146173,3.051222451857,3.80099721227599,12.0991008768177,8.49127136284464,0,0.246277562248017,6.3043568060606,1.24643300672138,0.732761168390412,0,1.29282956361551,1.3223260174269,1.36869470307464,0,1.38823636338003,1.41483874589699,4.14239055347196,2.48083010905975,0.395223263795889,0.243585196761792,0.638341257770182,0.544017803369474,1.5041393641362,0.919036730290385,1.31149052283922,0,0,0.854183854313742,0.625954653532499,1.14681839138014,0.221858103073705,0.124192805882767,0.276697269872462,1.12482367165896,0,1.14186133417987,1.88212655758537,0.468334905806882,0.579684114443301,4.6268988894931,4.67426619694449,3.32883516901568,3.4092540949516,4.27665432979378,6.22867855117575,3.66144109435078,2.7221566277383,5.75117642156288,5.47064054961645,7.32765128953031,5.84744045812686,6.05525531817412,8.29412415681711,9.03861829497182,15.652351854352,8.1139108858498,17.5170397597646,4.47557806525128,8.91058430092541,4.83347506691198,4.17630383890644,22.2933697671225,6.0004164699473,6.18112269329027,2.02049693259551,1.26184898228651,1.15571898244382,0.643324774124777,2.3489486276869,6.34776591434363,1.62065732026684,5.62894420364875,3.40268798054826,1.54400723580486,2.41212454536578,4.59391779459291,2.31496845925098,6.41981274481676,3.33113974164331,2.07258205038719,3.03859956177382,0,0.194860308839388,0.265729680626726,0.163565394255844,5.89697727923543,3.44082072255207,2.74705760366215,0,0.320075189082423,0.172214979660816,2.27006381426734,0.920529751259204,0.559518030877778,0,0.255788742607303,0.215649622793364,0.629063767423586,0.54604819096007,0.509197589862076,1.2754495206101,0.867550349813015,0.558644917973244,4.13405655849444,0.552032215008773,0,5.64281509905094,4.593682160298,0.0642292250964595,0,1.11743701340006,0.205116364240755,0.252071696221718,0.0691572524642179,0,1.42769420259154,0.88332946650923,0.353909170043221,2.93485757634686,0.577628330751691,2.66967466827017,0,0.198916222116275,0.601682626794058,4.43751151147744,0.781514011233092,0.523813388962845,5.40447327783319,2.06998520703863,0.0675375846183947,0,1.03343398250592,0.0634158101939068,0.546974809018219,0.548257766857182,2.48105589194647,0,1.40538670403555,1.07140367175657,0,0.606965604236632,0.227662191351298,0.887023701626388,0.115233987555779,3.42976018874837,0.135939465953663,0.0657727735628491,3.54581522651905,2.55832224351759,0.313972371402056,0.471346769748006,0.560544326627578,1.82631744101899,2.59113109462346,1.43325506366115,0,0.47404083519818,0.23248285073625,0,2.40513409419076,4.97318793991288,3.92652497316085,2.76503864725637,0.860454717640555,0.828324005113957,1.44862788090568,7.19757985324579,0.68732060563215,1.5510319283216,3.82215575590973,1.23040974977572,0,0.243835849964539,1.94228651156368,0.513314034281235,2.3196288626764,1.94284397223656,0,0.397901550322736,0.713520544665411,0.22589216407792,0.329821550236287,0.603851374266694,0.385870790539723,1.96703604453562,0.940634592723046,1.71603825227734,0.707029641304878,1.37415926980462,0.594092800654172,0.8453114551668,8.32642861970303,0.563903507879121,0.193373663920732,0.199882311849858,0.535661815816973,0.705789743431384,0.401206833445841,1.46067277649303,2.2936464170227,1.00337708206016,1.10440093535229,0,0,3.1741610430924,15.6237907630036,8.31916131536553,15.1419296743326,1.51399709802095,0.764859003745869,1.14028650910293,0.509944148709909,0,0.643264296743914,0.752122617877125,0.606229585745915,2.14371304124943,0,0.20686599172379,0.639701945702943,2.61870874610114,0.258355639344024,0.372448285775147,1.6819779387092,0.509177266225319,1.61693751166575,1.52401723527873,0.342233301085281,0,0.430333232356058,1.66330178273007,0.488419611665847,2.34800160930974,5.7921684686082,3.77265848847665,2.34640942403454,0.611207220914332,3.25516942652591,0,0.603821380773079,0.641136984606466 | |||
|short_description=p7@ITGB1 | |||
}} |
Revision as of 02:31, 11 January 2014
Short description: | p7@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_7_at_ITGB1_5end |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | 117bp_to_ENST00000464001_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.91e-14 | 76 |
muscle precursor cell | 8.25e-08 | 58 |
myoblast | 8.25e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.25e-08 | 58 |
mesodermal cell | 2.11e-07 | 121 |
preadipocyte | 2.69e-07 | 12 |
muscle cell | 6.12e-07 | 55 |
mesothelial cell | 6.83e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.46e-08 | 99 |
multilaminar epithelium | 1.38e-07 | 83 |
dense mesenchyme tissue | 1.91e-07 | 73 |
skeletal muscle tissue | 1.98e-07 | 62 |
striated muscle tissue | 1.98e-07 | 62 |
myotome | 1.98e-07 | 62 |
somite | 2.18e-07 | 71 |
presomitic mesoderm | 2.18e-07 | 71 |
presumptive segmental plate | 2.18e-07 | 71 |
dermomyotome | 2.18e-07 | 71 |
trunk paraxial mesoderm | 2.18e-07 | 71 |
muscle tissue | 3.43e-07 | 64 |
musculature | 3.43e-07 | 64 |
musculature of body | 3.43e-07 | 64 |
paraxial mesoderm | 4.55e-07 | 72 |
presumptive paraxial mesoderm | 4.55e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.64e-10 | 14 |