FFCP PHASE1:Hg19::chr10:54076522..54076534,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3025 | |||
|description=CAGE_peak_at_chr10:54076522..54076534,+ | |||
|id=chr10:54076522..54076534,+ | |||
|ontology_enrichment_celltype=CL:0002620!3.09e-13!23;CL:0000055!1.92e-11!180;CL:0000057!1.18e-09!75;CL:0000548!1.52e-07!679;CL:0000004!1.52e-07!679;CL:0000255!1.52e-07!679;CL:0000012!2.46e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.98e-20;23!CL:0002617;2.13e-10;2!CL:0002334;8.88e-10;12!CL:0002580;3.31e-07;3!CL:0002579;3.31e-07;3!CL:0000515;3.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.62e-20,23;CL:0000057,3.50e-11,76;CL:0002617,6.35e-11,2;CL:0002334,9.35e-10,12;CL:0002579,3.65e-07,3;CL:0002580,3.76e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.50e-08;3!DOID:127;6.50e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.53e-08,3;DOID:127,6.53e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.38e-09!40;UBERON:0002199!1.67e-07!45;UBERON:0002416!1.67e-07!45;UBERON:0003102!1.99e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;8.75e-12;10!UBERON:0005406;8.49e-11;2!UBERON:0001443;1.09e-10;11!UBERON:0002097;8.30e-10;41!UBERON:0003688;6.95e-08;6!UBERON:0002358;6.95e-08;6!UBERON:0003684;6.95e-08;6!UBERON:0001178;6.95e-08;6!UBERON:0002199;9.63e-08;46!UBERON:0002416;9.63e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.90e-12,41;UBERON:0000310,5.47e-12,10;UBERON:0005406,4.72e-11,2;UBERON:0001443,7.10e-11,11;UBERON:0002199,7.41e-11,46;UBERON:0002416,7.41e-11,46;UBERON:0003688,7.48e-08,6;UBERON:0002358,7.48e-08,6;UBERON:0003684,7.48e-08,6;UBERON:0001178,7.48e-08,6 | |||
|phase1_expression=1.99846217197612,1.92690471501885,0.422863212287913,6.00439790118782,0,1.74467704820074,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.735326160691737,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0,0.226864366320042,2.33206526395521,0.427114777637135,0.423863802319124,2.70081986475962,0.103052529238439,2.83404594050192,2.23340227597908,2.53164498361899,2.53336213419116,1.7670364197088,0.184099797284599,0.161646056818812,5.68015348026583,1.81353776809752,1.01736355386293,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0.723033089650446,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.603173834469785,0,0,0,0,0.115930404975077,0,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0,2.08014873822732,0,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.579125226670317,1.43833425785268,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60586089917446,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,1.24053903909388,0.460385919864187,1.68396056659844,0.384417447767103,1.53512174720011,1.28683136914886,2.96836132889982,0,0,0,0,0.464841513839837,0.241718899183244,0,0.184161977871793,0.229628896329213,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0.10115778085555,0,0.31481234683064,1.3940745403212,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.430234056612155,0.294747123039363,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,1.94310496754094,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,0,0.195984794828755,0,0,0,0.0967563312890851,0,0,0,0,0,0,0.397429223405979,0,0.195551382734803,0,0,0.19980960958213,0,1.25990255782507,0,0,0,0,1.49494626680975,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.329663433524666,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,3.25799761052228,0.864221491201268,3.91904832131291,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,1.24411862352257,0.53168342911599,0,0,0.761610424337591,0,0,0.107410557042488,0,0,0.400027764663154,0.686791410365586,0,0,0.192619830407303,0,0.260994291965212,0.453411851024545,1.62065732026684,1.22368352253234,0,0.308801447160972,0.219284049578707,0.706756583783524,0,0.506827321959218,0,0.345430341731199,1.82315973706429,0.138258436151731,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0.472775363535873,2.00216523405724,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.596493833314104,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49418284228802,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:54076522..54076534,+ | |||
}} |
Revision as of 02:51, 11 January 2014
Short description: | p@chr10:54076522..54076534, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54076522..54076534, + |
Coexpression cluster: | C3025_Fibroblast_gastric_astrocytoma_glioblastoma_colon_Adipocyte_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.62e-20 | 23 |
fibroblast | 3.50e-11 | 76 |
adipocyte of breast | 6.35e-11 | 2 |
preadipocyte | 9.35e-10 | 12 |
omentum preadipocyte | 3.65e-07 | 3 |
preadipocyte of the breast | 3.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.90e-12 | 41 |
breast | 5.47e-12 | 10 |
perirenal fat | 4.72e-11 | 2 |
chest | 7.10e-11 | 11 |
integument | 7.41e-11 | 46 |
integumental system | 7.41e-11 | 46 |
omentum | 7.48e-08 | 6 |
peritoneum | 7.48e-08 | 6 |
abdominal cavity | 7.48e-08 | 6 |
visceral peritoneum | 7.48e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.53e-08 | 3 |
leiomyoma | 6.53e-08 | 3 |