FFCP PHASE1:Hg19::chr10:72538478..72538484,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr10:72538478..72538484,- | |||
|id=chr10:72538478..72538484,- | |||
|ontology_enrichment_celltype=CL:0000080!3.56e-09!6;CL:0002617!1.28e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;5.96e-34;2!UBERON:0004872;9.43e-11;7 | |||
|ontology_enrichment_disease=DOID:3193!9.87e-08!2;DOID:962!9.87e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3193;5.96e-34;2!DOID:962;5.96e-34;2!DOID:1192;3.66e-23;3!DOID:169;2.59e-12;6!DOID:171;6.34e-08;10!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,5.04e-34,2;DOID:962,5.04e-34,2;DOID:1192,3.27e-23,3;DOID:169,2.45e-12,6;DOID:171,6.13e-08,10;DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.38e-17!7;UBERON:0002370!9.75e-14!4;UBERON:0005058!9.75e-14!4;UBERON:0009113!9.75e-14!4;UBERON:0003295!9.75e-14!4;UBERON:0005562!9.75e-14!4;UBERON:0000997!1.61e-13!1;UBERON:0005056!1.61e-13!1;UBERON:0001042!5.20e-12!10;UBERON:0009145!5.20e-12!10;UBERON:0006562!5.70e-11!11;UBERON:0003351!1.83e-09!6;UBERON:0008814!3.47e-08!15;UBERON:0003714!9.87e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.61e-34;2!UBERON:0005058;3.61e-34;2!UBERON:0009113;3.61e-34;2!UBERON:0003714;5.96e-34;2!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5!UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0001638;1.16e-08;9!UBERON:0003920;1.16e-08;9!UBERON:0000010;1.16e-08;8!UBERON:0004582;1.16e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,5.04e-34,2;UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000010,1.12e-08,8;UBERON:0001638,1.21e-08,9;UBERON:0003920,1.21e-08,9;UBERON:0004582,1.21e-08,9;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
|phase1_expression=0,0.428201047781966,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67593475391973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645889098360061,7.57311514409466,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p@chr10:72538478..72538484,- | |||
}} |
Revision as of 03:20, 11 January 2014
Short description: | p@chr10:72538478..72538484, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:72538478..72538484, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 5.04e-34 | 2 |
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
sympathetic nervous system | 1.60e-14 | 5 |
autonomic nervous system | 1.60e-14 | 5 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
peripheral nervous system | 1.12e-08 | 8 |
vein | 1.21e-08 | 9 |
venous blood vessel | 1.21e-08 | 9 |
venous system | 1.21e-08 | 9 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 5.04e-34 | 2 |
neurofibroma | 5.04e-34 | 2 |
peripheral nervous system neoplasm | 3.27e-23 | 3 |
neuroendocrine tumor | 2.45e-12 | 6 |
neuroectodermal tumor | 6.13e-08 | 10 |
nervous system cancer | 7.92e-07 | 11 |