FFCP PHASE1:Hg19::chr10:82228774..82228798,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr10:82228774..82228798,+ | |||
|id=chr10:82228774..82228798,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.97e-37!18;CL:0000789!4.97e-37!18;CL:0002420!4.97e-37!18;CL:0002419!4.97e-37!18;CL:0000790!4.97e-37!18;CL:0000625!1.22e-26!11;CL:0000084!3.28e-25!25;CL:0000827!3.28e-25!25;CL:0000838!7.24e-17!52;CL:0000542!1.98e-16!53;CL:0000051!1.98e-16!53;CL:0000624!1.77e-14!6;CL:0000898!2.87e-08!3;CL:0002087!4.00e-08!119;CL:0000842!5.58e-08!3;CL:0000738!3.52e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.53e-63;18!CL:0000789;2.53e-63;18!CL:0002419;2.53e-63;18!CL:0000625;4.08e-62;11!CL:0000084;6.27e-45;25!CL:0000542;1.24e-11;53!CL:0000624;4.07e-11;6!CL:0000898;1.58e-10;3!CL:0000895;1.13e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.61e-63,18;CL:0000789,2.61e-63,18;CL:0002420,2.61e-63,18;CL:0002419,2.61e-63,18;CL:0000790,2.61e-63,18;CL:0000625,3.85e-62,11;CL:0000084,6.42e-45,25;CL:0000827,6.42e-45,25;CL:0000838,2.50e-20,52;CL:0000542,6.72e-20,53;CL:0000051,6.72e-20,53;CL:0000624,4.29e-11,6;CL:0000898,1.62e-10,3;CL:0002087,4.04e-09,115;CL:0000810,1.13e-08,1;CL:0000895,1.13e-08,1;CL:0002436,1.13e-08,1;CL:0002427,1.13e-08,1;CL:0002428,1.13e-08,1;CL:0002429,1.13e-08,1;CL:0002433,1.13e-08,1;CL:0002431,1.13e-08,1;CL:0002432,1.13e-08,1;CL:0002031,2.41e-07,120;CL:0000738,2.56e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;2.53e-63;18!CL:0000051;1.24e-11;53!CL:0002427;1.13e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.44e-14!15;UBERON:0000179!1.44e-14!15;UBERON:0000463!1.44e-14!15;UBERON:0004177!1.36e-08!7;UBERON:0007023!1.81e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.47e-11;15!UBERON:0000179;3.47e-11;15!UBERON:0000463;3.47e-11;15!UBERON:0002372;4.40e-08;1!UBERON:0001961;4.40e-08;1!UBERON:0001744;4.40e-08;1!UBERON:0001042;4.40e-08;1!UBERON:0001735;4.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.08e-11,15;UBERON:0000179,3.08e-11,15;UBERON:0000463,3.08e-11,15;UBERON:0002372,6.24e-08,1;UBERON:0001961,6.24e-08,1;UBERON:0001744,6.24e-08,1;UBERON:0001735,6.24e-08,1;UBERON:0002370,6.48e-08,4;UBERON:0005058,6.48e-08,4;UBERON:0009113,6.48e-08,4;UBERON:0003295,6.48e-08,4;UBERON:0005562,6.48e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.393010762749165,0.616804496998528,0,2.28145586643513,1.89379122293893,1.94826728407911,0.111410456885174,0.294605907474837,1.32920336750173,0.812411591295047,0,0.520237390239513,0.164437904603676,0.276350017785848,1.15921234294021,6.22803565280654,2.67540828089713,4.18142095219907,0.906474741580529,4.21542542962113,0.34362744548263,2.27717722817553,3.50421955756506,3.90650072313851,3.8018081777935,4.51725357233318,3.07167866770604,3.74792179657038,1.89421801635213,3.28451198768419,1.00803371612366,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,0,0.952927101831156,0.822724546172388,1.94541993357815,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,1.0980114672121,0.993195428733726,0,0.0636471582781649,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | |||
|short_description=p@chr10:82228774..82228798,+ | |||
}} |
Revision as of 03:50, 11 January 2014
Short description: | p@chr10:82228774..82228798, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:82228774..82228798, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.61e-63 | 18 |
alpha-beta T cell | 2.61e-63 | 18 |
immature T cell | 2.61e-63 | 18 |
mature T cell | 2.61e-63 | 18 |
immature alpha-beta T cell | 2.61e-63 | 18 |
CD8-positive, alpha-beta T cell | 3.85e-62 | 11 |
T cell | 6.42e-45 | 25 |
pro-T cell | 6.42e-45 | 25 |
lymphoid lineage restricted progenitor cell | 2.50e-20 | 52 |
lymphocyte | 6.72e-20 | 53 |
common lymphoid progenitor | 6.72e-20 | 53 |
CD4-positive, alpha-beta T cell | 4.29e-11 | 6 |
naive T cell | 1.62e-10 | 3 |
nongranular leukocyte | 4.04e-09 | 115 |
CD4-positive, alpha-beta thymocyte | 1.13e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.13e-08 | 1 |
mature CD4 single-positive thymocyte | 1.13e-08 | 1 |
resting double-positive thymocyte | 1.13e-08 | 1 |
double-positive blast | 1.13e-08 | 1 |
CD69-positive double-positive thymocyte | 1.13e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.13e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.13e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.13e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 2.41e-07 | 120 |
leukocyte | 2.56e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 3.08e-11 | 15 |
haemolymphatic fluid | 3.08e-11 | 15 |
organism substance | 3.08e-11 | 15 |
tonsil | 6.24e-08 | 1 |
mucosa-associated lymphoid tissue | 6.24e-08 | 1 |
lymphoid tissue | 6.24e-08 | 1 |
tonsillar ring | 6.24e-08 | 1 |
thymus | 6.48e-08 | 4 |
hemolymphoid system gland | 6.48e-08 | 4 |
thymic region | 6.48e-08 | 4 |
pharyngeal gland | 6.48e-08 | 4 |
thymus primordium | 6.48e-08 | 4 |