FFCP PHASE1:Hg19::chr10:126432640..126432663,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28968 | |||
|TSSclassifier=strong | |||
|UniProt=Q14153 | |||
|association_with_transcript=-21bp_to_ENST00000337318_5end | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_4_at_FAM53B_5end | |||
|id=chr10:126432640..126432663,- | |||
|ontology_enrichment_celltype=CL:0000037!4.69e-29!172;CL:0000566!4.69e-29!172;CL:0000738!1.13e-27!140;CL:0000988!7.17e-27!182;CL:0002032!7.51e-27!165;CL:0000837!7.51e-27!165;CL:0002031!2.68e-20!124;CL:0002087!3.08e-20!119;CL:0000542!4.02e-16!53;CL:0000051!4.02e-16!53;CL:0000838!5.43e-16!52;CL:0000763!7.35e-12!112;CL:0000049!7.35e-12!112;CL:0000791!1.38e-10!18;CL:0000789!1.38e-10!18;CL:0002420!1.38e-10!18;CL:0002419!1.38e-10!18;CL:0000790!1.38e-10!18;CL:0000084!4.83e-09!25;CL:0000827!4.83e-09!25;CL:0000766!5.49e-09!76;CL:0000625!3.00e-08!11;CL:0000557!1.49e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.18e-15;18!CL:0000789;2.18e-15;18!CL:0002419;2.18e-15;18!CL:0000084;1.50e-13;25!CL:0000542;5.40e-13;53!CL:0000625;5.06e-12;11!CL:0000236;1.59e-08;13!CL:0000945;2.73e-07;24!CL:0002087;4.67e-07;104!CL:0000738;5.25e-07;136!CL:0000094;7.29e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.91e-32,136;CL:0000037,7.58e-31,168;CL:0000988,3.26e-28,177;CL:0002032,4.88e-28,161;CL:0000837,4.88e-28,161;CL:0002031,2.92e-24,120;CL:0002087,1.60e-23,115;CL:0000838,4.25e-22,52;CL:0000542,2.18e-21,53;CL:0000051,2.18e-21,53;CL:0000791,1.45e-15,18;CL:0000789,1.45e-15,18;CL:0002420,1.45e-15,18;CL:0002419,1.45e-15,18;CL:0000790,1.45e-15,18;CL:0000084,1.61e-13,25;CL:0000827,1.61e-13,25;CL:0000625,4.37e-12,11;CL:0000763,7.55e-10,108;CL:0000049,7.55e-10,108;CL:0000766,2.64e-09,72;CL:0002393,4.84e-08,9;CL:0002397,4.84e-08,9;CL:0000236,7.43e-08,14;CL:0000945,1.75e-07,24;CL:0000826,1.75e-07,24;CL:0000557,4.28e-07,67;CL:0000094,7.39e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.18e-15;18!CL:0000051;5.40e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.47e-16!115;UBERON:0002390!4.26e-11!102;UBERON:0003061!4.26e-11!102;UBERON:0002193!6.04e-10!112;UBERON:0001893!6.45e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0001049!2.18e-07!57;UBERON:0005068!2.18e-07!57;UBERON:0006241!2.18e-07!57;UBERON:0007135!2.18e-07!57;UBERON:0002020!2.91e-07!34;UBERON:0003528!2.91e-07!34;UBERON:0001869!3.18e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.13e-08;15!UBERON:0000179;2.13e-08;15!UBERON:0000463;2.13e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.73e-13,98;UBERON:0003061,9.73e-13,98;UBERON:0002193,1.50e-11,108;UBERON:0007023,2.41e-11,114;UBERON:0000178,2.41e-08,15;UBERON:0000179,2.41e-08,15;UBERON:0000463,2.41e-08,15;UBERON:0001893,3.52e-07,34;UBERON:0001950,4.86e-07,20;UBERON:0002405,7.83e-07,93 | |||
|phase1_expression=0,0.214100523890983,0,2.00146596706261,0,0,2.53299878168311,0,0,0.491467873003018,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.816002764977012,0.626909442956176,0,0.684372125364421,0.502170558379211,1.14620108621927,0.328402357799783,0.787107813136792,4.72037132218685,13.4340289334024,7.58599004248772,0,2.71085326900425,0.369754010166788,2.24654881682875,1.84820002233648,0,6.09394949385065,8.62341124121609,7.59538047505481,1.79132379391939,0.971680998056939,2.83333124397605,1.01778767145695,1.51150377475524,1.4555043671269,0.697287110717054,0,1.54853185447552,0.863077176966451,0,0.709446689665756,1.72372840368309,2.5819387343353,2.70852973188684,1.12945403725563,0.272906150057846,0.898893937780338,0.918251677112708,0.320929027076094,1.27867425159808,0.659702600373432,0.398927315243264,0.426224750532694,0.580418477257168,0,0,1.00499466102697,1.5644487552606,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,1.90129757680748,1.27562579979026,1.25795187305026,2.69588714751588,1.35159203557356,1.6072558669708,2.85012743741249,3.18266683518544,2.55729815270488,3.51992488922645,2.73069305631066,3.55803701545422,2.56038133539904,2.80277190925209,2.29900975981793,3.30522436392431,2.86216126360609,15.9379631350646,6.45960908308033,9.93910393125595,2.64342657158052,2.80254281490768,1.58030450865046,5.11445402295966,5.10913991573914,9.66327045297693,2.00623794468814,1.30368906653436,4.2610302516126,0,1.6711568532776,2.94605907474837,4.2091439970888,8.6657236404805,3.97083091149593,3.90178042679635,1.31550323682941,2.21080014228679,2.31842468588042,2.07601188426885,2.94294910898684,4.18142095219907,1.58633079776593,2.68254345521345,4.81078423675682,3.03623630423403,3.18565414324097,3.90650072313851,5.70271226669025,3.91495309602209,5.88738411310325,9.99445812418767,3.55165878066025,2.46338399076314,11.4915843638097,14.7092107680929,8.83428863685074,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.527008714158756,1.24430121722827,1.09288586487763,1.11235332835329,1.29818957461873,0.174129737299267,0.132957960518865,5.24679373471752,1.71598473234038,7.80060752792086,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.775250277507987,0.35576626268671,0.33472061276467,1.20848795132744,0.760272105718513,0.488124115096339,0.367663080345869,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.366403487860815,3.9534125230819,0,1.3082821564276,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0.490385709340376,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0,0,0,0.500474079487857,0,0,0,0.45071417671979,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0.757301322732344,0.184099797284599,0.323292113637624,0,0.10075209822764,0.169560592310488,0.57978255948989,0.272746120590835,0,0.609868530647977,0.530119073285941,0,0.207322110030741,0.252320850875628,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0.368965315629341,0,0.439001141634502,0,0.301586917234893,0.277765335475589,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,2.57545848628462,0.984868024349589,0.468008530278475,0.891786973732369,0,0.335964256397719,0.283550194484773,0.179117045405697,0,0.383382679165211,0.492663237895943,3.16974362447614,3.7319060797339,4.03535869567492,5.93339437103986,1.65094525159639,2.29193055334967,4.68869788840188,0,1.23392991243988,0.901029173531752,1.42913216315289,0.336393253036082,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0.799266537048298,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0.099972991182057,0,2.51128545716063,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.410952645100767,0.179060963239896,0.224170287987055,11.4277840917118,18.1127162881995,18.866426333123,0,0,0.773288812777695,1.17261385734044,0.637938751653163,2.24702107184155,8.97484377612075,3.31532410748828,0.24538298343828,0.500170521059677,0,0,0,0.473107245101804,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,1.02943027143257,6.82334486205528,5.1771408196468,7.57765660404455,0.303127571446259,0,2.11673205330776,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.241718899183244,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,0,0.451199612907412,0,0,2.92278449306521,0.105551628892876,0,0.510281115829547,0,0,0,0,0.764628819135115,0,0.447749509444357,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0,0.732555718546747,0.41254749960294,1.14853107599234,1.30012049207304,0,0.290012154876366,0.154048617114644,0,0.689182862422653,0,0.290033387828457,0.596586391912706,0.26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| |||
|short_description=p4@FAM53B | |||
}} |
Revision as of 05:28, 11 January 2014
Short description: | p4@FAM53B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM53B_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | -21bp_to_ENST00000337318_5end |
EntrezGene: | FAM53B |
HGNC: | 28968 |
UniProt: | Q14153 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.91e-32 | 136 |
hematopoietic stem cell | 7.58e-31 | 168 |
hematopoietic cell | 3.26e-28 | 177 |
hematopoietic oligopotent progenitor cell | 4.88e-28 | 161 |
hematopoietic multipotent progenitor cell | 4.88e-28 | 161 |
hematopoietic lineage restricted progenitor cell | 2.92e-24 | 120 |
nongranular leukocyte | 1.60e-23 | 115 |
lymphoid lineage restricted progenitor cell | 4.25e-22 | 52 |
lymphocyte | 2.18e-21 | 53 |
common lymphoid progenitor | 2.18e-21 | 53 |
mature alpha-beta T cell | 1.45e-15 | 18 |
alpha-beta T cell | 1.45e-15 | 18 |
immature T cell | 1.45e-15 | 18 |
mature T cell | 1.45e-15 | 18 |
immature alpha-beta T cell | 1.45e-15 | 18 |
T cell | 1.61e-13 | 25 |
pro-T cell | 1.61e-13 | 25 |
CD8-positive, alpha-beta T cell | 4.37e-12 | 11 |
myeloid cell | 7.55e-10 | 108 |
common myeloid progenitor | 7.55e-10 | 108 |
myeloid leukocyte | 2.64e-09 | 72 |
intermediate monocyte | 4.84e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.84e-08 | 9 |
B cell | 7.43e-08 | 14 |
lymphocyte of B lineage | 1.75e-07 | 24 |
pro-B cell | 1.75e-07 | 24 |
granulocyte monocyte progenitor cell | 4.28e-07 | 67 |
granulocyte | 7.39e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.73e-13 | 98 |
blood island | 9.73e-13 | 98 |
hemolymphoid system | 1.50e-11 | 108 |
adult organism | 2.41e-11 | 114 |
blood | 2.41e-08 | 15 |
haemolymphatic fluid | 2.41e-08 | 15 |
organism substance | 2.41e-08 | 15 |
telencephalon | 3.52e-07 | 34 |
neocortex | 4.86e-07 | 20 |
immune system | 7.83e-07 | 93 |