FFCP PHASE1:Hg19::chr10:135267421..135267431,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=619207 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000482993,NR_002934,uc001lng.2_5end | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_1_at_LOC619207_5end | |||
|id=chr10:135267421..135267431,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.93e-15!52;CL:0000542!4.25e-15!53;CL:0000051!4.25e-15!53;CL:0000084!6.30e-13!25;CL:0000827!6.30e-13!25;CL:0000037!1.47e-10!172;CL:0000566!1.47e-10!172;CL:0000791!2.26e-10!18;CL:0000789!2.26e-10!18;CL:0002420!2.26e-10!18;CL:0002419!2.26e-10!18;CL:0000790!2.26e-10!18;CL:0000988!9.97e-10!182;CL:0002032!6.87e-09!165;CL:0000837!6.87e-09!165;CL:0000842!4.23e-08!3;CL:0000738!1.28e-07!140;CL:0002087!3.20e-07!119;CL:0002127!9.79e-07!1;CL:0000914!9.79e-07!1;CL:0000911!9.79e-07!1;CL:0000814!9.79e-07!1;CL:0002042!9.79e-07!1;CL:0002039!9.79e-07!1;CL:0002040!9.79e-07!1;CL:0002041!9.79e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.31e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.26e-07,52;CL:0000945,1.36e-07,24;CL:0000826,1.36e-07,24;CL:0000542,1.70e-07,53;CL:0000051,1.70e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:2531!4.66e-11!51;DOID:0060083!4.66e-11!51;DOID:0060058!2.16e-09!10;DOID:1240!7.80e-08!39;DOID:2355!3.73e-07!1;DOID:630!3.95e-07!1;DOID:0050177!3.95e-07!1;DOID:0050427!3.95e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;2.70e-40;1!DOID:0060058;3.88e-36;10!DOID:74;6.30e-21;2!DOID:1287;3.60e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.30e-40,1;DOID:0060058,3.88e-36,10;DOID:74,6.96e-21,2;DOID:1287,3.79e-11,4;DOID:2531,8.80e-08,51;DOID:0060083,8.80e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000200!2.59e-08!6;UBERON:0002771!6.98e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.557052284425868,0,0.221533894583621,0,0.512365278902701,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,1.5602073798847,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,2.46169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0.503464760927528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1007533168552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52357584004011,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,3.7977639251473,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p1@LOC619207 | |||
}} |
Revision as of 05:44, 11 January 2014
Short description: | p1@LOC619207 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC619207_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 0bp_to_ENST00000482993, NR_002934, uc001lng.2_5end |
EntrezGene: | LOC619207 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.26e-07 | 52 |
lymphocyte of B lineage | 1.36e-07 | 24 |
pro-B cell | 1.36e-07 | 24 |
lymphocyte | 1.70e-07 | 53 |
common lymphoid progenitor | 1.70e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.30e-40 | 1 |
lymphoma | 3.88e-36 | 10 |
hematopoietic system disease | 6.96e-21 | 2 |
cardiovascular system disease | 3.79e-11 | 4 |
hematologic cancer | 8.80e-08 | 51 |
immune system cancer | 8.80e-08 | 51 |