FFCP PHASE1:Hg19::chr11:619727..619755,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr11:619727..619755,- | |||
|id=chr11:619727..619755,- | |||
|ontology_enrichment_celltype=CL:0002563!4.76e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.59e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.91e-25!27;UBERON:0001155!3.87e-25!9;UBERON:0000059!1.45e-20!11;UBERON:0005409!1.60e-19!35;UBERON:0001154!2.28e-10!1;UBERON:0001153!2.28e-10!1;UBERON:0001242!4.76e-10!4;UBERON:0001262!4.76e-10!4;UBERON:0004786!4.76e-10!4;UBERON:0004808!4.76e-10!4;UBERON:0001277!4.76e-10!4;UBERON:0004921!8.22e-10!129;UBERON:0004185!8.22e-10!129;UBERON:0001007!3.24e-09!155;UBERON:0001555!3.24e-09!155;UBERON:0007026!3.24e-09!155;UBERON:0004119!2.92e-08!169;UBERON:0000925!2.92e-08!169;UBERON:0006595!2.92e-08!169;UBERON:0003350!3.27e-08!5;UBERON:0004907!4.69e-08!5;UBERON:0003929!1.48e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.17e-49;17!UBERON:0002108;1.89e-45;4!UBERON:0005409;9.65e-39;22!UBERON:0004921;1.01e-23;33!UBERON:0001155;6.16e-12;9!UBERON:0001007;2.61e-11;81!UBERON:0001555;3.17e-10;54!UBERON:0000059;6.06e-10;11!UBERON:0002114;1.05e-09;2!UBERON:0001242;1.80e-07;4!UBERON:0001262;1.80e-07;4!UBERON:0004786;1.80e-07;4!UBERON:0004808;1.80e-07;4!UBERON:0001277;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.36e-49,17;UBERON:0002108,1.89e-45,4;UBERON:0005409,2.74e-34,25;UBERON:0004921,2.56e-13,118;UBERON:0001155,7.27e-12,9;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0000059,6.93e-10,11;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0002114,1.01e-09,2;UBERON:0001242,1.59e-07,4;UBERON:0001262,1.59e-07,4;UBERON:0004786,1.59e-07,4;UBERON:0004808,1.59e-07,4;UBERON:0001277,1.59e-07,4;UBERON:0011216,6.23e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,1.06149077404007,1.22206028986725,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39892701215285,5.68254857310289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:619727..619755,- | |||
}} |
Revision as of 05:50, 11 January 2014
Short description: | p@chr11:619727..619755, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:619727..619755, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.36e-49 | 17 |
small intestine | 1.89e-45 | 4 |
gastrointestinal system | 2.74e-34 | 25 |
subdivision of digestive tract | 2.56e-13 | 118 |
colon | 7.27e-12 | 9 |
digestive system | 7.53e-11 | 145 |
digestive tract | 7.53e-11 | 145 |
primitive gut | 7.53e-11 | 145 |
large intestine | 6.93e-10 | 11 |
endoderm-derived structure | 7.84e-10 | 160 |
endoderm | 7.84e-10 | 160 |
presumptive endoderm | 7.84e-10 | 160 |
duodenum | 1.01e-09 | 2 |
intestinal mucosa | 1.59e-07 | 4 |
wall of intestine | 1.59e-07 | 4 |
gastrointestinal system mucosa | 1.59e-07 | 4 |
gastrointestinal system epithelium | 1.59e-07 | 4 |
intestinal epithelium | 1.59e-07 | 4 |
organ system subdivision | 6.23e-07 | 223 |