FFCP PHASE1:Hg19::chr11:108794408..108794422,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C557 | |||
|description=CAGE_peak_at_chr11:108794408..108794422,+ | |||
|id=chr11:108794408..108794422,+ | |||
|ontology_enrichment_celltype=CL:0002144!1.56e-28!3;CL:0005020!1.21e-14!6;CL:0002138!1.21e-14!6;CL:0005022!1.21e-14!6;CL:0002139!1.41e-13!24;CL:0000115!3.65e-09!35;CL:0000213!3.08e-07!57;CL:0000215!3.08e-07!57;CL:0002078!3.44e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.83e-66;6!CL:0002139;1.03e-17;24!CL:0000115;1.64e-10;36!CL:0002078;3.69e-09;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.83e-66,6;CL:0002138,2.83e-66,6;CL:0005022,2.83e-66,6;CL:0002139,1.03e-17,24;CL:0000115,2.91e-12,36;CL:0002078,4.55e-10,45;CL:0000213,4.33e-08,58;CL:0000215,4.33e-08,58 | |||
|ontology_enrichment_development_v019=CL:0005022;2.83e-66;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001915!1.56e-28!3;UBERON:0001982!1.56e-28!3;UBERON:0001473!4.04e-11!8;UBERON:0004536!4.04e-11!8;UBERON:0006558!4.04e-11!8;UBERON:0002426!8.95e-11!1;UBERON:0003831!8.95e-11!1;UBERON:0003898!8.95e-11!1;UBERON:0004830!8.95e-11!1;UBERON:0001774!8.95e-11!1;UBERON:0003830!8.95e-11!1;UBERON:0005175!8.95e-11!1;UBERON:0003897!8.95e-11!1;UBERON:0001103!8.95e-11!1;UBERON:0010084!8.95e-11!1;UBERON:0006834!3.01e-10!1;UBERON:0002465!5.38e-09!10;UBERON:0002046!3.05e-08!5;UBERON:0004117!3.05e-08!5;UBERON:0007689!3.05e-08!5;UBERON:0007123!3.05e-08!5;UBERON:0003091!3.05e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.99e-50;8!UBERON:0004536;3.99e-50;8!UBERON:0006558;3.99e-50;8!UBERON:0002465;2.00e-40;10!UBERON:0002405;6.71e-16;27!UBERON:0002193;1.71e-11;42!UBERON:0000055;7.87e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.99e-50,8;UBERON:0004536,3.99e-50,8;UBERON:0006558,3.99e-50,8;UBERON:0002465,2.00e-40,10;UBERON:0000055,4.47e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0.976248230192678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76409277611544,0,5.89787871927255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25458863311266,0.404234377916439,0.435433495793923,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:108794408..108794422,+ | |||
}} |
Revision as of 10:12, 11 January 2014
Short description: | p@chr11:108794408..108794422, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:108794408..108794422, + |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.83e-66 | 6 |
endothelial cell of lymphatic vessel | 2.83e-66 | 6 |
vascular lymphangioblast | 2.83e-66 | 6 |
endothelial cell of vascular tree | 1.03e-17 | 24 |
endothelial cell | 2.91e-12 | 36 |
meso-epithelial cell | 4.55e-10 | 45 |
lining cell | 4.33e-08 | 58 |
barrier cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.99e-50 | 8 |
lymph vasculature | 3.99e-50 | 8 |
lymphatic part of lymphoid system | 3.99e-50 | 8 |
lymphoid system | 2.00e-40 | 10 |
vessel | 4.47e-07 | 68 |