FFCP PHASE1:Hg19::chr11:125439386..125439406,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9538 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13276 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000535422_5end | |||
|description=CAGE_peak_2_at_EI24_5end | |||
|id=chr11:125439386..125439406,+ | |||
|ontology_enrichment_celltype=CL:0002321!9.45e-31!248;CL:0000220!4.47e-30!246;CL:0000066!2.18e-22!254;CL:0000222!4.97e-11!119;CL:0000221!8.37e-11!71;CL:0002139!3.31e-10!24;CL:0000548!7.19e-10!679;CL:0000004!7.19e-10!679;CL:0000255!7.19e-10!679;CL:0000213!1.35e-09!57;CL:0000215!1.35e-09!57;CL:0000012!1.36e-09!682;CL:0000115!2.37e-09!35;CL:0000076!3.07e-09!62;CL:0002078!8.85e-09!44;CL:0000055!2.65e-08!180;CL:0000071!2.80e-08!18;CL:0002546!2.80e-08!18;CL:0000133!1.42e-07!59;CL:0000144!3.12e-07!625;CL:0000223!7.94e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.70e-10;24!CL:0000071;3.67e-08;18!CL:0000115;3.75e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.26e-31,250;CL:0000066,9.06e-22,253;CL:0000222,4.14e-11,121;CL:0000221,8.89e-11,72;CL:0002139,2.61e-10,24;CL:0000213,6.47e-10,58;CL:0000215,6.47e-10,58;CL:0000115,1.13e-09,36;CL:0000076,4.27e-09,63;CL:0002078,5.56e-09,45;CL:0000071,2.32e-08,18;CL:0002546,2.32e-08,18;CL:0000133,1.26e-07,59;CL:0000223,7.24e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;3.67e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!4.06e-09!138;UBERON:0002049!4.31e-09!79;UBERON:0007798!4.31e-09!79;UBERON:0001986!2.80e-08!18;UBERON:0004638!2.80e-08!18;UBERON:0004852!2.80e-08!18;UBERON:0003914!5.79e-08!118;UBERON:0000119!1.12e-07!312;UBERON:0002100!1.34e-07!216;UBERON:0003104!1.39e-07!238;UBERON:0009142!1.39e-07!238;UBERON:0006914!1.97e-07!25;UBERON:0000487!2.16e-07!22;UBERON:0000483!3.71e-07!309;UBERON:0000055!4.94e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.67e-08;18!UBERON:0001986;3.67e-08;18!UBERON:0004852;3.67e-08;18!UBERON:0000490;6.55e-08;33!UBERON:0000487;2.61e-07;22!UBERON:0006914;3.02e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.24e-08,78;UBERON:0007798,1.24e-08,78;UBERON:0000490,1.92e-08,148;UBERON:0004638,2.32e-08,18;UBERON:0001986,2.32e-08,18;UBERON:0004852,2.32e-08,18;UBERON:0000119,4.38e-08,309;UBERON:0003914,1.23e-07,117;UBERON:0000483,1.52e-07,306;UBERON:0006914,2.27e-07,25;UBERON:0000487,2.54e-07,22;UBERON:0002100,8.11e-07,199 | |||
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| |||
|short_description=p2@EI24 | |||
}} |
Revision as of 11:05, 11 January 2014
Short description: | p2@EI24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EI24_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000535422_5end |
EntrezGene: | EI24 |
HGNC: | 13276 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.26e-31 | 250 |
epithelial cell | 9.06e-22 | 253 |
mesodermal cell | 4.14e-11 | 121 |
ectodermal cell | 8.89e-11 | 72 |
endothelial cell of vascular tree | 2.61e-10 | 24 |
lining cell | 6.47e-10 | 58 |
barrier cell | 6.47e-10 | 58 |
endothelial cell | 1.13e-09 | 36 |
squamous epithelial cell | 4.27e-09 | 63 |
meso-epithelial cell | 5.56e-09 | 45 |
blood vessel endothelial cell | 2.32e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.32e-08 | 18 |
neurectodermal cell | 1.26e-07 | 59 |
endodermal cell | 7.24e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.24e-08 | 78 |
vascular system | 1.24e-08 | 78 |
unilaminar epithelium | 1.92e-08 | 148 |
blood vessel endothelium | 2.32e-08 | 18 |
endothelium | 2.32e-08 | 18 |
cardiovascular system endothelium | 2.32e-08 | 18 |
cell layer | 4.38e-08 | 309 |
epithelial tube | 1.23e-07 | 117 |
epithelium | 1.52e-07 | 306 |
squamous epithelium | 2.27e-07 | 25 |
simple squamous epithelium | 2.54e-07 | 22 |
trunk | 8.11e-07 | 199 |