FFCP PHASE1:Hg19::chr12:1704484..1704497,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:1704484..1704497,- | |||
|id=chr12:1704484..1704497,- | |||
|ontology_enrichment_celltype=CL:0002057!4.09e-15!42;CL:0000860!7.80e-14!45;CL:0000839!5.63e-11!70;CL:0000557!9.31e-11!71;CL:0000766!9.38e-10!76;CL:0002194!1.45e-08!63;CL:0000576!1.45e-08!63;CL:0000040!1.45e-08!63;CL:0000559!1.45e-08!63;CL:0002009!3.43e-08!65;CL:0000763!1.59e-07!112;CL:0000049!1.59e-07!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.58e-13;7!UBERON:0006965;2.59e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-10!115;UBERON:0002371!4.81e-09!80;UBERON:0001049!9.69e-09!57;UBERON:0005068!9.69e-09!57;UBERON:0006241!9.69e-09!57;UBERON:0007135!9.69e-09!57;UBERON:0001474!4.15e-08!86;UBERON:0002390!5.00e-08!102;UBERON:0003061!5.00e-08!102;UBERON:0001017!8.38e-08!82;UBERON:0002405!1.97e-07!115;UBERON:0005743!2.95e-07!86;UBERON:0000073!4.89e-07!94;UBERON:0001016!4.89e-07!94;UBERON:0002193!6.95e-07!112;UBERON:0002346!9.93e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.08e-18;5!UBERON:0005057;1.08e-18;5!UBERON:0002370;1.56e-12;2!UBERON:0005058;1.56e-12;2!UBERON:0009113;1.56e-12;2!UBERON:0002106;1.21e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.31e-13,7;UBERON:0005057,1.31e-13,7;UBERON:0002106,1.40e-08,3;UBERON:0004854,1.40e-08,3;UBERON:0009034,1.40e-08,3;UBERON:0002095,1.40e-08,3;UBERON:0004782,1.40e-08,3;UBERON:0003281,1.40e-08,3;UBERON:0009664,1.40e-08,3;UBERON:0002296,1.40e-08,3;UBERON:0005602,1.40e-08,3;UBERON:0001179,1.40e-08,3;UBERON:0006293,1.40e-08,3;UBERON:0002405,1.89e-08,93;UBERON:0002390,5.10e-08,98;UBERON:0003061,5.10e-08,98;UBERON:0002193,2.83e-07,108;UBERON:0002370,6.50e-07,4;UBERON:0005058,6.50e-07,4;UBERON:0009113,6.50e-07,4;UBERON:0003295,6.50e-07,4;UBERON:0005562,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485168122375632,0.464858073811369,0.411167888021826,2.16794459626573,0.28769239232215,0,0.236482229888585,0,1.93645405075148,1.35426486594342,0,0,0.898893937780338,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0,0,0,0.75374599577023,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.59398390600856,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.533937062838473,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,1.16024198352439,0,0,0,0,0,0,0.860037498908708,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0.36757959813938,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,2.79336214331361,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:1704484..1704497,- | |||
}} |
Revision as of 11:26, 11 January 2014
Short description: | p@chr12:1704484..1704497, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:1704484..1704497, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.31e-13 | 7 |
immune organ | 1.31e-13 | 7 |
spleen | 1.40e-08 | 3 |
gastrointestinal system mesentery | 1.40e-08 | 3 |
stomach region | 1.40e-08 | 3 |
mesentery | 1.40e-08 | 3 |
gastrointestinal system serosa | 1.40e-08 | 3 |
mesentery of stomach | 1.40e-08 | 3 |
gut mesentery | 1.40e-08 | 3 |
dorsal mesentery | 1.40e-08 | 3 |
dorsal mesogastrium | 1.40e-08 | 3 |
peritoneal cavity | 1.40e-08 | 3 |
spleen primordium | 1.40e-08 | 3 |
immune system | 1.89e-08 | 93 |
hematopoietic system | 5.10e-08 | 98 |
blood island | 5.10e-08 | 98 |
hemolymphoid system | 2.83e-07 | 108 |
thymus | 6.50e-07 | 4 |
hemolymphoid system gland | 6.50e-07 | 4 |
thymic region | 6.50e-07 | 4 |
pharyngeal gland | 6.50e-07 | 4 |
thymus primordium | 6.50e-07 | 4 |