FFCP PHASE1:Hg19::chr12:25054986..25054996,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |||
|TSSclassifier=weak | |||
|UniProt=Q68DQ7 | |||
|association_with_transcript=233bp_to_ENST00000538118_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_30_at_BCAT1_5end | |||
|id=chr12:25054986..25054996,- | |||
|ontology_enrichment_celltype=CL:0002139!5.63e-25!24;CL:0000071!1.82e-17!18;CL:0002546!1.82e-17!18;CL:0000115!1.90e-17!35;CL:0002078!9.76e-13!44;CL:1000413!5.00e-11!9;CL:0002322!1.06e-09!5;CL:0005020!3.19e-09!6;CL:0002138!3.19e-09!6;CL:0005022!3.19e-09!6;CL:0000213!1.21e-08!57;CL:0000215!1.21e-08!57;CL:0002618!2.53e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.23e-24;7!CL:0000586;5.23e-24;7!CL:0002139;2.37e-12;24!CL:0000047;2.72e-10;2!CL:0002545;2.72e-10;2!CL:0000071;1.36e-09;18!CL:0000115;2.66e-07;36!CL:0002144;2.79e-07;3!CL:0002618;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.83e-24,7;CL:0000586,3.83e-24,7;CL:0002139,2.52e-12,24;CL:0002545,2.99e-10,2;CL:0000071,1.44e-09,18;CL:0002546,1.44e-09,18;CL:0000115,2.54e-08,36;CL:0002144,2.47e-07,3;CL:0002618,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.98e-17;10!UBERON:0005564;4.98e-17;10!CL:0002546;1.36e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.44e-08;22!DOID:2994;4.44e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.03e-08,22;DOID:2994,4.03e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.75e-21!57;UBERON:0005068!5.75e-21!57;UBERON:0006241!5.75e-21!57;UBERON:0007135!5.75e-21!57;UBERON:0003075!1.75e-19!86;UBERON:0007284!1.75e-19!86;UBERON:0003056!5.09e-19!61;UBERON:0000073!7.39e-19!94;UBERON:0001016!7.39e-19!94;UBERON:0002616!2.07e-18!59;UBERON:0002346!3.59e-18!90;UBERON:0005743!3.94e-18!86;UBERON:0001986!1.82e-17!18;UBERON:0004638!1.82e-17!18;UBERON:0004852!1.82e-17!18;UBERON:0002780!2.31e-17!41;UBERON:0001890!2.31e-17!41;UBERON:0006240!2.31e-17!41;UBERON:0000955!5.45e-17!69;UBERON:0006238!5.45e-17!69;UBERON:0003080!8.23e-17!42;UBERON:0001017!1.06e-16!82;UBERON:0002020!6.36e-16!34;UBERON:0003528!6.36e-16!34;UBERON:0001893!9.18e-16!34;UBERON:0001869!3.08e-15!32;UBERON:0002791!1.23e-14!33;UBERON:0000487!1.23e-13!22;UBERON:0006914!1.40e-11!25;UBERON:0000033!1.88e-11!123;UBERON:0003915!5.00e-11!9;UBERON:0004700!5.00e-11!9;UBERON:0001917!5.00e-11!9;UBERON:0000956!9.48e-11!25;UBERON:0000203!9.48e-11!25;UBERON:0000025!9.82e-11!194;UBERON:0000153!1.72e-10!129;UBERON:0007811!1.72e-10!129;UBERON:0004121!4.35e-10!169;UBERON:0000924!1.30e-09!173;UBERON:0006601!1.30e-09!173;UBERON:0004111!2.43e-09!241;UBERON:0002298!2.08e-08!8;UBERON:0001950!2.99e-08!20;UBERON:0000483!5.41e-08!309;UBERON:0007023!6.40e-08!115;UBERON:0000119!8.79e-08!312;UBERON:0000468!1.21e-07!659;UBERON:0002619!2.46e-07!22;UBERON:0000477!2.62e-07!286;UBERON:0000200!2.84e-07!6;UBERON:0002049!5.13e-07!79;UBERON:0007798!5.13e-07!79;UBERON:0002308!7.40e-07!9;UBERON:0000125!7.40e-07!9;UBERON:0001473!9.04e-07!8;UBERON:0004536!9.04e-07!8;UBERON:0006558!9.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.20e-21;8!UBERON:0003135;1.52e-15;11!UBERON:0005800;2.72e-10;2!UBERON:0001515;2.72e-10;2!UBERON:0004638;1.36e-09;18!UBERON:0001986;1.36e-09;18!UBERON:0004852;1.36e-09;18!UBERON:0000991;1.95e-08;21!UBERON:0003101;4.44e-08;22!UBERON:0000079;4.44e-08;22!UBERON:0000487;5.93e-08;22!UBERON:0010523;2.79e-07;3!UBERON:0001915;2.79e-07;3!UBERON:0001982;2.79e-07;3!UBERON:0006914;4.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.20e-21,8;UBERON:0003135,1.25e-15,11;UBERON:0005800,2.99e-10,2;UBERON:0001515,2.99e-10,2;UBERON:0004638,1.44e-09,18;UBERON:0001986,1.44e-09,18;UBERON:0004852,1.44e-09,18;UBERON:0000991,1.76e-08,21;UBERON:0009196,1.76e-08,21;UBERON:0009117,1.76e-08,21;UBERON:0005564,1.76e-08,21;UBERON:0004176,4.03e-08,22;UBERON:0003101,4.03e-08,22;UBERON:0000079,4.03e-08,22;UBERON:0000487,6.23e-08,22;UBERON:0010523,2.47e-07,3;UBERON:0001915,2.47e-07,3;UBERON:0001982,2.47e-07,3;UBERON:0006914,4.79e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.619412741790207,0,0,0,0.689491361473237,0.645484683583826,0,0,0,0,0.612167784741805,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0.993812036833525,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.775250277507987,2.13459757612026,0,1.61131726843659,0,0.488124115096339,1.10298924103761,0,0.625098097988558,0.44905874525234,1.0135033243499,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.464775771478074,0.10366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0.721832238805369,0.925971025153221,0.190254152234598,0,0,0,1.17002132569619,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0.988823245360557,0,0,0,0,2.0453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.857440047187092,0.611727596791485,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,1.83579893535567,8.55095696849794,2.48116228744081,0.752122617877125,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p30@BCAT1 | |||
}} |
Revision as of 12:41, 11 January 2014
Short description: | p30@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 233bp_to_ENST00000538118_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | Q68DQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.83e-24 | 7 |
germ cell | 3.83e-24 | 7 |
endothelial cell of vascular tree | 2.52e-12 | 24 |
thoracic aorta endothelial cell | 2.99e-10 | 2 |
blood vessel endothelial cell | 1.44e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.44e-09 | 18 |
endothelial cell | 2.54e-08 | 36 |
capillary endothelial cell | 2.47e-07 | 3 |
endothelial cell of umbilical vein | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.20e-21 | 8 |
male reproductive organ | 1.25e-15 | 11 |
segment of aorta | 2.99e-10 | 2 |
thoracic aorta | 2.99e-10 | 2 |
blood vessel endothelium | 1.44e-09 | 18 |
endothelium | 1.44e-09 | 18 |
cardiovascular system endothelium | 1.44e-09 | 18 |
gonad | 1.76e-08 | 21 |
indifferent external genitalia | 1.76e-08 | 21 |
indifferent gonad | 1.76e-08 | 21 |
gonad primordium | 1.76e-08 | 21 |
external genitalia | 4.03e-08 | 22 |
male organism | 4.03e-08 | 22 |
male reproductive system | 4.03e-08 | 22 |
simple squamous epithelium | 6.23e-08 | 22 |
microcirculatory vessel | 2.47e-07 | 3 |
endothelium of capillary | 2.47e-07 | 3 |
capillary | 2.47e-07 | 3 |
squamous epithelium | 4.79e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.03e-08 | 22 |
germ cell cancer | 4.03e-08 | 22 |