FFCP PHASE1:Hg19::chr12:56623827..56623866,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283375 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20502 | |||
|TSSclassifier=strong | |||
|UniProt=C9JPS6,C9JPS5,C9JIB2,C9JB28,Q6ZMH5 | |||
|association_with_transcript=0bp_to_ENST00000417965,ENST00000419753,ENST00000424625,ENST00000436633,ENST00000454355,ENST00000481103,ENST00000493574_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_1_at_SLC39A5_5end | |||
|id=chr12:56623827..56623866,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.16e-21!12;CL:0000417!1.16e-21!12;CL:0000668!1.16e-21!12;CL:0000414!1.16e-21!12;CL:0000412!1.16e-21!12;CL:0000182!1.16e-21!12;CL:0002322!3.44e-13!5;CL:0000223!6.58e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.78e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.88e-22,12;CL:0000223,1.72e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.35e-24;11!UBERON:0009497;3.53e-20;13!UBERON:0003104;3.54e-16;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.23e-21!19;UBERON:0006925!6.23e-21!19;UBERON:0008836!6.23e-21!19;UBERON:0009854!1.79e-20!23;UBERON:0009497!1.11e-18!25;UBERON:0000015!1.11e-18!25;UBERON:0002423!1.11e-18!25;UBERON:0006235!1.11e-18!25;UBERON:0004161!1.11e-18!25;UBERON:0009856!7.60e-18!26;UBERON:0008835!8.33e-18!22;UBERON:0003894!8.33e-18!22;UBERON:0005057!9.32e-18!26;UBERON:0005409!1.78e-17!35;UBERON:0000160!9.15e-17!27;UBERON:0007499!1.98e-15!25;UBERON:0005172!4.63e-14!55;UBERON:0005173!4.63e-14!55;UBERON:0000059!1.01e-13!11;UBERON:0004921!2.25e-13!129;UBERON:0004185!2.25e-13!129;UBERON:0003929!1.63e-12!54;UBERON:0002417!2.41e-12!61;UBERON:0000916!2.41e-12!61;UBERON:0002365!4.61e-12!31;UBERON:0002330!4.61e-12!31;UBERON:0001155!4.95e-12!9;UBERON:0001007!2.61e-11!155;UBERON:0001555!2.61e-11!155;UBERON:0007026!2.61e-11!155;UBERON:0002368!1.84e-10!35;UBERON:0004119!6.61e-10!169;UBERON:0000925!6.61e-10!169;UBERON:0006595!6.61e-10!169;UBERON:0000949!2.08e-09!45;UBERON:0004907!4.00e-08!5;UBERON:0005911!3.24e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.04e-30;17!UBERON:0005409;1.36e-27;22!UBERON:0002107;1.43e-22;19!UBERON:0006925;1.43e-22;19!UBERON:0002423;1.16e-20;25!UBERON:0000059;7.65e-18;11!UBERON:0004921;4.06e-17;33!UBERON:0001155;1.47e-15;9!UBERON:0002365;6.99e-13;31!UBERON:0002330;6.99e-13;31!UBERON:0001007;1.43e-12;81!UBERON:0002368;2.63e-11;33!UBERON:0002108;3.44e-11;4!UBERON:0004907;2.59e-10;5!UBERON:0000949;1.66e-09;43!UBERON:0005172;2.41e-08;52!UBERON:0005173;2.41e-08;52!UBERON:0002417;3.36e-07;58!UBERON:0000916;3.36e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.18e-30,17;UBERON:0005409,3.74e-24,25;UBERON:0009854,1.43e-22,23;UBERON:0002107,1.45e-22,19;UBERON:0006925,1.45e-22,19;UBERON:0008836,1.45e-22,19;UBERON:0009497,1.17e-20,25;UBERON:0000015,1.17e-20,25;UBERON:0002423,1.17e-20,25;UBERON:0006235,1.17e-20,25;UBERON:0004161,1.17e-20,25;UBERON:0009856,9.28e-20,26;UBERON:0008835,2.77e-19,22;UBERON:0003894,2.77e-19,22;UBERON:0000059,7.32e-18,11;UBERON:0007499,8.66e-17,25;UBERON:0004921,2.55e-16,118;UBERON:0001155,1.41e-15,9;UBERON:0003929,7.01e-15,54;UBERON:0005172,7.75e-15,54;UBERON:0005173,7.75e-15,54;UBERON:0001007,6.80e-14,145;UBERON:0001555,6.80e-14,145;UBERON:0007026,6.80e-14,145;UBERON:0002365,3.01e-13,31;UBERON:0002330,3.01e-13,31;UBERON:0002417,4.31e-13,60;UBERON:0000916,4.31e-13,60;UBERON:0004119,3.66e-12,160;UBERON:0000925,3.66e-12,160;UBERON:0006595,3.66e-12,160;UBERON:0002368,1.46e-11,35;UBERON:0002108,3.56e-11,4;UBERON:0000949,1.02e-10,45;UBERON:0004907,2.55e-10,5;UBERON:0005911,6.47e-09,82;UBERON:0005177,5.87e-08,101;UBERON:0002530,9.16e-08,59;UBERON:0011216,2.56e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.0722165631724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,1.51052125730374,0.414644220061482,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.5616111429859,18.6737171168749,10.0434284135839,0,16.234473887691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4393192147713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9147484633281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.5979945616467,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,2.21027132424918,9.06957892275394,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7428334289795,0,12.9384051040206,46.2633062352464,26.8853263770795,0,0,0,0,0,0,0,0,0,0,19.3585145677862,0,0.063186579628488,0,0,0,0,0,0,1.13843818411917,0,0,0,0,1.92199335066233,0,0,0,0,0,0,0,0,0,0,0,0,6.61704283691993,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,11.6495949527454,8.58736687148738,8.32400169649781,8.4928465256273,0.295282444544246,0,0,0,0,0,0,0,0,0,0,16.70680994743,16.4182860862544,0,0,0,0,0,0,0,0,0,0,0,0,0,26.672506529411,38.4269977845442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5042241797295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56579360254748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,3.29178397452127,0,0,0,0,0,0,0,0,0,0,77.6372030565923,26.4457068209788,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,2.19100916473955,0,0,0,0,0,22.2191273016468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SLC39A5 | |||
}} |
Revision as of 14:01, 11 January 2014
Short description: | p1@SLC39A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC39A5_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_ENST00000417965, ENST00000419753, ENST00000424625, ENST00000436633, ENST00000454355, ENST00000481103, ENST00000493574_5end |
EntrezGene: | SLC39A5 |
HGNC: | 20502 |
UniProt: | C9JPS6C9JPS5C9JIB2C9JB28Q6ZMH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.88e-22 | 12 |
endodermal cell | 1.72e-09 | 58 |