FFCP PHASE1:Hg19::chr12:110449219..110449232,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr12:110449219..110449232,+ | |||
|id=chr12:110449219..110449232,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.93e-41!53;CL:0000051!5.93e-41!53;CL:0000945!6.45e-39!24;CL:0000826!6.45e-39!24;CL:0000838!5.39e-38!52;CL:0002087!2.50e-24!119;CL:0002031!3.28e-21!124;CL:0000738!8.34e-20!140;CL:0002032!2.14e-17!165;CL:0000837!2.14e-17!165;CL:0000037!1.92e-16!172;CL:0000566!1.92e-16!172;CL:0000988!3.32e-15!182;CL:0000623!6.16e-15!3;CL:0000825!6.16e-15!3;CL:0000785!5.53e-11!2;CL:0000955!5.53e-11!2;CL:0000818!5.53e-11!2;CL:0000954!5.53e-11!2;CL:0000816!5.53e-11!2;CL:0000236!8.46e-09!14;CL:0000817!1.35e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.18e-50;24!CL:0000542;3.68e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.18e-50,24;CL:0000826,4.18e-50,24;CL:0000838,2.91e-23,52;CL:0000542,7.94e-23,53;CL:0000051,7.94e-23,53;CL:0002087,1.84e-10,115;CL:0002031,5.00e-10,120;CL:0000738,7.53e-09,136;CL:0002032,1.81e-07,161;CL:0000837,1.81e-07,161;CL:0000037,3.74e-07,168;CL:0000988,8.75e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;3.68e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.63e-18!10;DOID:2531!4.27e-08!51;DOID:0060083!4.27e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.51e-40;10!DOID:630;8.64e-26;1!DOID:0050177;8.64e-26;1!DOID:0050427;8.64e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.51e-40,10;DOID:630,5.93e-26,1;DOID:0050177,5.93e-26,1;DOID:0050427,5.93e-26,1;DOID:2531,2.81e-08,51;DOID:0060083,2.81e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000007!4.75e-11!2;UBERON:0002106!1.39e-07!3;UBERON:0004854!1.39e-07!3;UBERON:0009034!1.39e-07!3;UBERON:0002095!1.39e-07!3;UBERON:0004782!1.39e-07!3;UBERON:0003281!1.39e-07!3;UBERON:0009664!1.39e-07!3;UBERON:0002296!1.39e-07!3;UBERON:0005602!1.39e-07!3;UBERON:0001179!1.39e-07!3;UBERON:0006293!1.39e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.39571002064908,1.02324015707783,0,0,0,0,0,0,3.40855682553327,2.98555388223585,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07047417247523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,9.69429212471811,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |||
|short_description=p@chr12:110449219..110449232,+ | |||
}} |
Revision as of 15:50, 11 January 2014
Short description: | p@chr12:110449219..110449232, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:110449219..110449232, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.18e-50 | 24 |
pro-B cell | 4.18e-50 | 24 |
lymphoid lineage restricted progenitor cell | 2.91e-23 | 52 |
lymphocyte | 7.94e-23 | 53 |
common lymphoid progenitor | 7.94e-23 | 53 |
nongranular leukocyte | 1.84e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 5.00e-10 | 120 |
leukocyte | 7.53e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-07 | 161 |
hematopoietic stem cell | 3.74e-07 | 168 |
hematopoietic cell | 8.75e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.01e-09 | 3 |
gastrointestinal system mesentery | 1.01e-09 | 3 |
stomach region | 1.01e-09 | 3 |
mesentery | 1.01e-09 | 3 |
gastrointestinal system serosa | 1.01e-09 | 3 |
mesentery of stomach | 1.01e-09 | 3 |
gut mesentery | 1.01e-09 | 3 |
dorsal mesentery | 1.01e-09 | 3 |
dorsal mesogastrium | 1.01e-09 | 3 |
peritoneal cavity | 1.01e-09 | 3 |
spleen primordium | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.51e-40 | 10 |
genetic disease | 5.93e-26 | 1 |
monogenic disease | 5.93e-26 | 1 |
xeroderma pigmentosum | 5.93e-26 | 1 |
hematologic cancer | 2.81e-08 | 51 |
immune system cancer | 2.81e-08 | 51 |