FFCP PHASE1:Hg19::chr12:115777087..115777091,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:115777087..115777091,+ | |||
|id=chr12:115777087..115777091,+ | |||
|ontology_enrichment_celltype=CL:0002367!4.70e-21!2;CL:0002552!4.68e-19!5;CL:0002556!4.52e-16!6;CL:0000057!5.39e-12!75;CL:0002574!1.18e-11!1;CL:0002601!2.18e-11!1;CL:0000342!2.68e-11!1;CL:0002565!2.68e-11!1;CL:0002551!1.63e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002574;2.21e-40;1!CL:0002552;1.70e-32;5!CL:0002556;2.38e-27;6!CL:0000057;1.47e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002574,2.21e-40,1;CL:0002552,1.99e-32,5;CL:0002556,2.08e-27,6;CL:0000057,5.06e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005969!4.70e-21!2;UBERON:0003956!4.70e-21!2;UBERON:0001758!4.52e-16!6;UBERON:0003672!4.52e-16!6;UBERON:0001444!5.81e-16!48;UBERON:0002203!1.30e-15!6;UBERON:0001768!1.30e-15!6;UBERON:0000165!8.24e-13!28;UBERON:0000930!8.24e-13!28;UBERON:0001828!3.93e-12!8;UBERON:0002506!2.68e-11!1;UBERON:0001769!2.68e-11!1;UBERON:0003102!3.64e-09!95;UBERON:0003129!5.19e-09!11;UBERON:0002200!9.13e-09!11;UBERON:0006876!9.13e-09!11;UBERON:0000075!1.07e-07!13;UBERON:0005944!1.07e-07!13;UBERON:0004288!1.07e-07!13;UBERON:0003089!1.07e-07!13;UBERON:0000991!1.08e-07!21;UBERON:0009196!1.08e-07!21;UBERON:0009117!1.08e-07!21;UBERON:0005564!1.08e-07!21;UBERON:0004176!2.38e-07!22;UBERON:0001801!5.45e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;2.38e-27;6!UBERON:0003672;2.38e-27;6!UBERON:0003129;1.28e-23;7!UBERON:0000165;2.98e-23;28!UBERON:0001828;8.98e-21;8!UBERON:0011137;1.88e-15;11!UBERON:0010323;1.88e-15;11!UBERON:0003729;3.22e-13;13!UBERON:0007811;4.33e-12;52!UBERON:0001444;1.07e-11;48!UBERON:0000075;5.84e-11;16!UBERON:0000033;2.17e-10;50!UBERON:0000153;6.77e-10;54!UBERON:0000161;2.26e-09;19!UBERON:0000166;2.26e-09;19!UBERON:0000344;5.93e-09;20!UBERON:0001555;6.46e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,2.08e-27,6;UBERON:0003672,2.08e-27,6;UBERON:0003129,1.14e-23,7;UBERON:0000165,1.76e-22,29;UBERON:0000930,1.76e-22,29;UBERON:0001828,9.92e-21,8;UBERON:0010323,1.74e-15,11;UBERON:0001444,1.27e-13,49;UBERON:0003729,3.43e-13,13;UBERON:0011137,2.12e-12,14;UBERON:0000033,5.21e-12,56;UBERON:0000075,5.55e-11,16;UBERON:0000153,6.50e-11,62;UBERON:0007811,6.50e-11,62;UBERON:0000344,6.17e-09,20;UBERON:0000166,3.27e-08,22;UBERON:0003102,4.61e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,2.65400422631361,0.61417158655884,1.03325781175765,0,0,0,0,1.68336113954066,0.625592599359821,3.04770527032601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04260337361699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:115777087..115777091,+ | |||
}} |
Revision as of 16:05, 11 January 2014
Short description: | p@chr12:115777087..115777091, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:115777087..115777091, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 2.21e-40 | 1 |
fibroblast of gingiva | 1.99e-32 | 5 |
fibroblast of periodontium | 2.08e-27 | 6 |
fibroblast | 5.06e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
periodontium | 2.08e-27 | 6 |
dentition | 2.08e-27 | 6 |
skull | 1.14e-23 | 7 |
mouth | 1.76e-22 | 29 |
stomodeum | 1.76e-22 | 29 |
gingiva | 9.92e-21 | 8 |
cranial skeletal system | 1.74e-15 | 11 |
subdivision of head | 1.27e-13 | 49 |
mouth mucosa | 3.43e-13 | 13 |
axial skeletal system | 2.12e-12 | 14 |
head | 5.21e-12 | 56 |
subdivision of skeletal system | 5.55e-11 | 16 |
anterior region of body | 6.50e-11 | 62 |
craniocervical region | 6.50e-11 | 62 |
mucosa | 6.17e-09 | 20 |
oral opening | 3.27e-08 | 22 |
surface structure | 4.61e-07 | 99 |