FFCP PHASE1:Hg19::chr13:33780107..33780116,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19164 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000399365_5end | |||
|coexpression_cluster_id=C2262 | |||
|description=CAGE_peak_9_at_STARD13_5end | |||
|id=chr13:33780107..33780116,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.25e-22;24!CL:0000946;1.93e-16;1!CL:0000786;1.93e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.30e-22,24;CL:0000826,1.30e-22,24;CL:0000946,1.41e-16,1;CL:0000786,1.41e-16,1;CL:0000980,1.41e-16,1;CL:0000838,2.45e-10,52;CL:0000542,3.88e-10,53;CL:0000051,3.88e-10,53;CL:0000785,5.94e-09,2;CL:0000955,5.94e-09,2;CL:0000818,5.94e-09,2;CL:0000954,5.94e-09,2;CL:0000816,5.94e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000954;6.93e-09;2 | |||
|ontology_enrichment_disease=DOID:171!4.82e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3371;6.47e-17;1!DOID:4549;6.47e-17;1!DOID:5861;6.47e-17;1!DOID:6496;6.47e-17;1!DOID:630;1.93e-16;1!DOID:0050177;1.93e-16;1!DOID:0050427;1.93e-16;1!DOID:2355;1.93e-16;1!DOID:171;1.47e-14;10!DOID:74;6.93e-09;2!DOID:3095;6.35e-07;22!DOID:2994;6.35e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.47e-17,1;DOID:4549,6.47e-17,1;DOID:5861,6.47e-17,1;DOID:6496,6.47e-17,1;DOID:2355,2.25e-16,1;DOID:630,2.63e-16,1;DOID:0050177,2.63e-16,1;DOID:0050427,2.63e-16,1;DOID:171,1.47e-14,10;DOID:74,7.49e-09,2;DOID:3095,6.35e-07,22;DOID:2994,6.35e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-27!115;UBERON:0002346!3.72e-18!90;UBERON:0001869!3.76e-18!32;UBERON:0001049!7.10e-18!57;UBERON:0005068!7.10e-18!57;UBERON:0006241!7.10e-18!57;UBERON:0007135!7.10e-18!57;UBERON:0002619!2.05e-17!22;UBERON:0001950!4.17e-17!20;UBERON:0001893!8.78e-17!34;UBERON:0002020!1.29e-16!34;UBERON:0003528!1.29e-16!34;UBERON:0002780!4.02e-16!41;UBERON:0001890!4.02e-16!41;UBERON:0006240!4.02e-16!41;UBERON:0003080!1.33e-15!42;UBERON:0002791!1.70e-15!33;UBERON:0001017!3.21e-15!82;UBERON:0000956!6.81e-15!25;UBERON:0000203!6.81e-15!25;UBERON:0000955!2.22e-14!69;UBERON:0006238!2.22e-14!69;UBERON:0002616!3.19e-14!59;UBERON:0003075!3.57e-14!86;UBERON:0007284!3.57e-14!86;UBERON:0005743!4.10e-14!86;UBERON:0000073!4.54e-14!94;UBERON:0001016!4.54e-14!94;UBERON:0003056!3.38e-12!61;UBERON:0000924!1.53e-11!173;UBERON:0006601!1.53e-11!173;UBERON:0000033!5.40e-11!123;UBERON:0000153!7.73e-11!129;UBERON:0007811!7.73e-11!129;UBERON:0004121!5.14e-09!169;UBERON:0000200!2.66e-08!6;UBERON:0002771!7.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.21e-16;4!UBERON:0000923;1.21e-16;4!UBERON:0010316;1.21e-16;4!UBERON:0005291;1.21e-16;4!UBERON:0007195;1.93e-16;1!UBERON:0002050;1.63e-13;5!UBERON:0005423;1.63e-13;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.07e-16,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,2.38091709404843,2.99100968991981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0.659215496907038,0,0.597743964753209,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0.874813840149763,0.173624994933292,0,0.482385754501632,0,0,0,0,0,0,0.153900517007594,0,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,4.23629408119201,0,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.943225830597996,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0.655745261419609,0,0,0.366078794705889,0.876336514945499,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,1.41539347670307,0,0.169732529954025,5.73952284274544,6.32072397720911,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.159633859057151,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0.879356221798103,0,0,0,0,0,0,1.72850981333669,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0,0,0.581207126840626,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0.599646935549574,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,1.28227396921293 | |||
|short_description=p9@STARD13 | |||
}} |
Revision as of 17:17, 11 January 2014
Short description: | p9@STARD13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_STARD13_5end |
Coexpression cluster: | C2262_neuroectodermal_extraskeletal_neuroblastoma_B_carcinoid_plasma_choriocarcinoma |
Association with transcript: | 26bp_to_ENST00000399365_5end |
EntrezGene: | STARD13 |
HGNC: | 19164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.30e-22 | 24 |
pro-B cell | 1.30e-22 | 24 |
antibody secreting cell | 1.41e-16 | 1 |
plasma cell | 1.41e-16 | 1 |
plasmablast | 1.41e-16 | 1 |
lymphoid lineage restricted progenitor cell | 2.45e-10 | 52 |
lymphocyte | 3.88e-10 | 53 |
common lymphoid progenitor | 3.88e-10 | 53 |
mature B cell | 5.94e-09 | 2 |
pre-B-II cell | 5.94e-09 | 2 |
transitional stage B cell | 5.94e-09 | 2 |
small pre-B-II cell | 5.94e-09 | 2 |
immature B cell | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.07e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.47e-17 | 1 |
extraosseous chondrosarcoma | 6.47e-17 | 1 |
myxoid chondrosarcoma | 6.47e-17 | 1 |
extraskeletal myxoid chondrosarcoma | 6.47e-17 | 1 |
anemia | 2.25e-16 | 1 |
genetic disease | 2.63e-16 | 1 |
monogenic disease | 2.63e-16 | 1 |
xeroderma pigmentosum | 2.63e-16 | 1 |
neuroectodermal tumor | 1.47e-14 | 10 |
hematopoietic system disease | 7.49e-09 | 2 |
germ cell and embryonal cancer | 6.35e-07 | 22 |
germ cell cancer | 6.35e-07 | 22 |