FFCP PHASE1:Hg19::chr13:73636516..73636532,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6349 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-173bp_to_ENST00000464404_5end | |||
|coexpression_cluster_id=C1709 | |||
|description=CAGE_peak_3_at_KLF5_5end | |||
|id=chr13:73636516..73636532,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.46e-19!254;CL:0002076!7.23e-18!43;CL:0000223!2.17e-13!59;CL:0002251!1.61e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.09e-16;42!CL:0002251;4.33e-13;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.34e-22,42;CL:0000066,3.32e-18,253;CL:0000223,9.86e-17,58;CL:0002251,4.05e-13,20 | |||
|ontology_enrichment_development_v019=CL:0000223;6.48e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.21e-15!106;DOID:0050687!4.86e-11!143;DOID:299!1.98e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.38e-11;25!DOID:1749;3.74e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.12e-17,106;DOID:0050687,1.55e-12,143;DOID:299,1.99e-11,25;DOID:1749,1.88e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.99e-13!169;UBERON:0000925!5.99e-13!169;UBERON:0006595!5.99e-13!169;UBERON:0001007!4.79e-10!155;UBERON:0001555!4.79e-10!155;UBERON:0007026!4.79e-10!155;UBERON:0004921!5.59e-09!129;UBERON:0004185!5.59e-09!129;UBERON:0001004!3.43e-08!72;UBERON:0000062!5.61e-08!511;UBERON:0000077!3.18e-07!130;UBERON:0005156!8.86e-07!59;UBERON:0000990!8.86e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.72e-12;33!UBERON:0005409;1.20e-10;22!UBERON:0001737;1.35e-08;9!UBERON:0001557;1.35e-08;9!UBERON:0001041;6.71e-08;14!UBERON:0000160;9.78e-08;17!UBERON:0000974;1.81e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.92e-15,160;UBERON:0000925,3.92e-15,160;UBERON:0006595,3.92e-15,160;UBERON:0001007,1.11e-11,145;UBERON:0001555,1.11e-11,145;UBERON:0007026,1.11e-11,145;UBERON:0004921,2.36e-10,118;UBERON:0001737,5.10e-09,9;UBERON:0005409,7.04e-09,25;UBERON:0000160,8.05e-08,17;UBERON:0001004,2.18e-07,74 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.527533956456907,0.618831764800233,0.662794751455832,1.34465029290355,0.602694528023977,0,0.975865597581014,0,0,0,0,0.684372125364421,0.251085279189606,0,0,0,0.786728553697808,0,0.464448369948228,1.83884244895785,0.30120591877825,1.10926203050036,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.290796477559129,0.377875943688809,0,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,1.72372840368309,2.5819387343353,1.35426486594342,0,0,0.449446968890169,0.612167784741805,0.641858054152187,1.27867425159808,1.31940520074686,0.398927315243264,1.27867425159808,0.870627715885752,0,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,1.94826728407911,0.111410456885174,0,0,0,0.512365278902701,1.43065282315866,0.493313713811028,0,0.289803085735052,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0.443458794925128,0.263504357079378,0.392937226493138,1.45718115317017,3.33705998505986,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,3.87780264148325,3.05265836499774,0,0.25326102332916,0,0,0.709336764396714,0,0,0,0.622422070799533,0,0.326923806226917,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,2.15267562826634,0.640672166455702,0.635795703478686,0,0.309157587715317,0.515281080091258,0.558350568994769,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0.508681776931463,0.773043412653187,0.818238361772504,0.286804595389004,0,0,0.116193942869518,0.310983165046111,0,0.72995471815166,0,0,0,1.85747171212792,2.16563844500876,1.65629520055781,2.52877035117153,1.20505514941741,2.64705534557745,1.52515610864684,1.66089433377768,1.34831308160164,1.96221465125346,1.92373578473195,0,0,0,0,0,0,0.590789906681404,0.441463099414651,2.09080345523293,0.343135620597051,2.30475599358114,0,3.11639814476056,2.22212268380471,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,1.17587489739202,0.425325291727159,4.47792613514241,5.81267877027924,1.15014803749563,0,0,0.414656231081544,0.288239906833923,0.37872730027914,0.444485260045183,0.381988425558278,0,0,0.719792448923265,0.901029173531752,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,2.10833939483032,0,0,0,0.144781306667579,1.02738161275192,0.358121926479791,0.112085143993527,0,0,0,0,0,1.54657762555539,0,0.637938751653163,5.24304916763028,8.97484377612075,0,0.36807447515742,1.50051156317903,0,0.623912584592421,1.07057393278297,0.788512075169673,0.35142424497814,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0.647142602455851,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0.153461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.64341568457443,0,0.616838775210622,0,0.0821271560138091,0.519254429183621,0,2.53804844142407,3.40860999515584,10.3130707608204,0.459257792658427,0.728364672026868,0.393373244878272,0.451199612907412,0.693138033939733,0.784349769176855,1.46139224653261,1.05551628892876,0,0,0.431831832204279,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0.656029291399411,0.650756789328606,0,0.183138929636687,0.082509499920588,0.574265537996172,3.25030123018261,0,0.290012154876366,0.308097234229289,0.307007349452259,0.275673144969061,0.107420244868274,0.290033387828457,0.511359764496605,0.890320356467374,4.79326254546837,2.88285101047659,2.55225424989168,2.52894452138875,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.962221127255121,0.670302275535787,1.08890984861323,0.376575203107117,1.29151611801369,1.68471475667626,2.66058092122005,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0,0,0,0,1.92495971052672,3.43056302373444,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,2.05854594449042,0.146508179271894,0,0,0,6.20735660317994,1.48482340416319,5.52889263778618,0,0.562677665642051,0.222617410045812,0,2.95575571379191,0.796991953004279,0.552567831062295,0.755798243562828,0.409074730008619,0,0,0.539210106883961,4.11748701753901,0,0.887790650732402,0,0,0,0,0,1.04171104434093,0.0874599999961957,0,2.38966241399549,0.762760950878299,0,0.344743373241465,0.291604613383254,0,0.885741385813839,1.80894657938112,0,0,0,0.658156191461918,0,4.1827123283581,1.00035336054936,0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| |||
|short_description=p3@KLF5 | |||
}} |
Revision as of 18:01, 11 January 2014
Short description: | p3@KLF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLF5_5end |
Coexpression cluster: | C1709_salivary_signet_Prostate_cervical_keratoacanthoma_rectal_tubular |
Association with transcript: | -173bp_to_ENST00000464404_5end |
EntrezGene: | KLF5 |
HGNC: | 6349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.34e-22 | 42 |
epithelial cell | 3.32e-18 | 253 |
endodermal cell | 9.86e-17 | 58 |
epithelial cell of alimentary canal | 4.05e-13 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.92e-15 | 160 |
endoderm | 3.92e-15 | 160 |
presumptive endoderm | 3.92e-15 | 160 |
digestive system | 1.11e-11 | 145 |
digestive tract | 1.11e-11 | 145 |
primitive gut | 1.11e-11 | 145 |
subdivision of digestive tract | 2.36e-10 | 118 |
larynx | 5.10e-09 | 9 |
gastrointestinal system | 7.04e-09 | 25 |
intestine | 8.05e-08 | 17 |
respiratory system | 2.18e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.12e-17 | 106 |
cell type cancer | 1.55e-12 | 143 |
adenocarcinoma | 1.99e-11 | 25 |
squamous cell carcinoma | 1.88e-07 | 14 |