FFCP PHASE1:Hg19::chr14:22918081..22918089,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12256 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENST00000448914_5end | |||
|coexpression_cluster_id=C1184 | |||
|description=CAGE_peak_1_at_TRDD3_5end | |||
|id=chr14:22918081..22918089,+ | |||
|ontology_enrichment_celltype=CL:0000623!1.54e-12!3;CL:0000825!1.54e-12!3;CL:0000767!2.59e-12!3;CL:0002605!9.66e-12!3;CL:0000738!8.37e-09!140;CL:0000128!1.68e-08!7;CL:0000126!1.68e-08!7;CL:0000127!1.68e-08!7;CL:0002453!1.68e-08!7;CL:0002549!6.53e-08!2;CL:0000838!1.74e-07!52;CL:0000542!2.69e-07!53;CL:0000051!2.69e-07!53;CL:0002087!4.16e-07!119;CL:0000988!6.32e-07!182;CL:0000037!6.83e-07!172;CL:0000566!6.83e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.99e-44;3!CL:0000767;9.32e-43;3!CL:0000094;1.65e-16;8!CL:0002127;9.98e-16;1!CL:0000911;9.98e-16;1!CL:0000814;9.98e-16;1!CL:0000081;3.51e-12;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.94e-44,3;CL:0000825,6.94e-44,3;CL:0000767,5.25e-43,3;CL:0000094,1.34e-16,8;CL:0002127,7.46e-16,1;CL:0000914,7.46e-16,1;CL:0000911,7.46e-16,1;CL:0000814,7.46e-16,1;CL:0002042,7.46e-16,1;CL:0002039,7.46e-16,1;CL:0002040,7.46e-16,1;CL:0002041,7.46e-16,1;CL:0000081,3.01e-12,11;CL:0000738,2.31e-09,136;CL:0000893,1.39e-08,2;CL:0002489,1.39e-08,2;CL:0000809,1.39e-08,2;CL:0000808,1.39e-08,2;CL:0000894,1.39e-08,2;CL:0000806,1.39e-08,2;CL:0000807,1.39e-08,2;CL:0000805,1.39e-08,2;CL:0002425,1.39e-08,2;CL:0000037,2.25e-07,168;CL:0000988,6.07e-07,177;CL:0000838,6.47e-07,52;CL:0000542,8.78e-07,53;CL:0000051,8.78e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002425;1.61e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.74e-12!7;UBERON:0000178!2.98e-11!15;UBERON:0000179!2.98e-11!15;UBERON:0000463!2.98e-11!15;UBERON:0002370!1.80e-08!4;UBERON:0005058!1.80e-08!4;UBERON:0009113!1.80e-08!4;UBERON:0003295!1.80e-08!4;UBERON:0005562!1.80e-08!4;UBERON:0003947!6.53e-08!2;UBERON:0005629!6.53e-08!2;UBERON:0005358!6.53e-08!2;UBERON:0001886!6.53e-08!2;UBERON:0004086!6.53e-08!2;UBERON:0005282!6.53e-08!2;UBERON:0005281!6.53e-08!2;UBERON:0002390!6.75e-07!102;UBERON:0003061!6.75e-07!102;UBERON:0002193!8.28e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.15e-09;15!UBERON:0000179;5.15e-09;15!UBERON:0000463;5.15e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.08e-09,15;UBERON:0000179,6.08e-09,15;UBERON:0000463,6.08e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,2.28988789704845,0.958120975510189,0.251085279189606,0.0764134057479513,0.328402357799783,0,1.57345710739562,2.68680578668049,1.39334510984468,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.434021741431704,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,1.95325036156926,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,5.51686128565396,2.15627574859517,4.2353201972317,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,1.07857100409308,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0,0,0.411362273086194,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0.365377795142688,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,2.03302947670128,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@TRDD3 | |||
}} |
Revision as of 19:06, 11 January 2014
Short description: | p1@TRDD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRDD3_5end |
Coexpression cluster: | C1184_Natural_Basophils_blood_NK_Peripheral_Whole_CD8 |
Association with transcript: | -15bp_to_ENST00000448914_5end |
EntrezGene: | NA |
HGNC: | 12256 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 6.94e-44 | 3 |
pro-NK cell | 6.94e-44 | 3 |
basophil | 5.25e-43 | 3 |
granulocyte | 1.34e-16 | 8 |
innate effector T cell | 7.46e-16 | 1 |
immature NK T cell | 7.46e-16 | 1 |
effector T cell | 7.46e-16 | 1 |
mature NK T cell | 7.46e-16 | 1 |
immature NK T cell stage IV | 7.46e-16 | 1 |
immature NK T cell stage I | 7.46e-16 | 1 |
immature NK T cell stage II | 7.46e-16 | 1 |
immature NK T cell stage III | 7.46e-16 | 1 |
blood cell | 3.01e-12 | 11 |
leukocyte | 2.31e-09 | 136 |
thymocyte | 1.39e-08 | 2 |
double negative thymocyte | 1.39e-08 | 2 |
double-positive, alpha-beta thymocyte | 1.39e-08 | 2 |
DN4 thymocyte | 1.39e-08 | 2 |
DN1 thymic pro-T cell | 1.39e-08 | 2 |
DN2 thymocyte | 1.39e-08 | 2 |
DN3 thymocyte | 1.39e-08 | 2 |
immature single positive thymocyte | 1.39e-08 | 2 |
early T lineage precursor | 1.39e-08 | 2 |
hematopoietic stem cell | 2.25e-07 | 168 |
hematopoietic cell | 6.07e-07 | 177 |
lymphoid lineage restricted progenitor cell | 6.47e-07 | 52 |
lymphocyte | 8.78e-07 | 53 |
common lymphoid progenitor | 8.78e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 6.08e-09 | 15 |
haemolymphatic fluid | 6.08e-09 | 15 |
organism substance | 6.08e-09 | 15 |