FFCP PHASE1:Hg19::chr15:39885653..39885673,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11785 | |||
|TSSclassifier=strong | |||
|UniProt=P07996 | |||
|association_with_transcript=-8bp_to_M99425_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_32_at_THBS1_5end | |||
|id=chr15:39885653..39885673,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.26e-13!24;CL:0002371!2.15e-12!591;CL:0000057!4.74e-12!75;CL:0000055!1.65e-11!180;CL:0000144!4.28e-11!625;CL:0000222!2.22e-10!119;CL:0000071!4.02e-10!18;CL:0002546!4.02e-10!18;CL:0000012!8.13e-10!682;CL:0000548!8.49e-10!679;CL:0000004!8.49e-10!679;CL:0000255!8.49e-10!679;CL:0000115!4.45e-09!35;CL:0002078!1.10e-07!44;CL:0002620!1.14e-07!23;CL:0000213!3.05e-07!57;CL:0000215!3.05e-07!57;CL:0000220!3.60e-07!246;CL:0002321!4.11e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.33e-13;24!CL:0002620;6.13e-12;23!CL:0000115;1.62e-10;36!CL:0000071;5.07e-10;18!CL:0002334;1.20e-07;12!CL:0002580;2.36e-07;3!CL:0000136;7.88e-07;13!CL:0002579;9.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.83e-16,76;CL:0002139,1.10e-13,24;CL:0002620,5.99e-12,23;CL:0000115,1.05e-11,36;CL:0000071,4.51e-10,18;CL:0002546,4.51e-10,18;CL:0002078,1.93e-08,45;CL:0002334,1.21e-07,12;CL:0002580,2.17e-07,3;CL:0000213,2.60e-07,58;CL:0000215,2.60e-07,58;CL:0000222,3.77e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;5.07e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.01e-09;5!DOID:450;3.01e-09;5!DOID:66;3.01e-09;5!DOID:423;3.01e-09;5!DOID:0080000;3.01e-09;5!DOID:11722;3.01e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.51e-09,5;DOID:450,1.51e-09,5;DOID:66,1.51e-09,5;DOID:423,1.51e-09,5;DOID:0080000,1.51e-09,5;DOID:11722,1.51e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.85e-16!69;UBERON:0004872!4.84e-15!84;UBERON:0002049!1.45e-14!79;UBERON:0007798!1.45e-14!79;UBERON:0001981!3.06e-14!60;UBERON:0007500!3.06e-14!60;UBERON:0004537!3.06e-14!60;UBERON:0006965!3.06e-14!60;UBERON:0001637!2.61e-11!42;UBERON:0003509!2.61e-11!42;UBERON:0004572!2.61e-11!42;UBERON:0004535!5.10e-11!110;UBERON:0001009!1.10e-10!113;UBERON:0003914!1.35e-10!118;UBERON:0001986!4.02e-10!18;UBERON:0004638!4.02e-10!18;UBERON:0004852!4.02e-10!18;UBERON:0002199!5.36e-10!45;UBERON:0002416!5.36e-10!45;UBERON:0004573!3.03e-09!33;UBERON:0004571!3.03e-09!33;UBERON:0000487!3.71e-09!22;UBERON:0004923!3.80e-09!57;UBERON:0000947!7.89e-09!21;UBERON:0010191!7.89e-09!21;UBERON:0006914!8.91e-09!25;UBERON:0003102!1.94e-08!95;UBERON:0002097!2.35e-08!40;UBERON:0000468!2.63e-08!659;UBERON:0000490!1.06e-07!138;UBERON:0000467!1.35e-07!625;UBERON:0000480!1.76e-07!626;UBERON:0003081!6.43e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.19e-11;6!UBERON:0002358;1.19e-11;6!UBERON:0003684;1.19e-11;6!UBERON:0001178;1.19e-11;6!UBERON:0004638;5.07e-10;18!UBERON:0001986;5.07e-10;18!UBERON:0004852;5.07e-10;18!UBERON:0002097;1.57e-09;41!UBERON:0000487;3.06e-09;22!UBERON:0007500;4.82e-09;56!UBERON:0001981;4.82e-09;56!UBERON:0004537;4.82e-09;56!UBERON:0002199;1.00e-08;46!UBERON:0002416;1.00e-08;46!UBERON:0004573;1.66e-08;33!UBERON:0004571;1.66e-08;33!UBERON:0001637;1.88e-08;42!UBERON:0003509;1.88e-08;42!UBERON:0004572;1.88e-08;42!UBERON:0000947;2.18e-08;21!UBERON:0010191;2.18e-08;21!UBERON:0000055;3.08e-08;65!UBERON:0006914;8.47e-08;25!UBERON:0004457;1.89e-07;9!UBERON:0000042;1.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.60e-14,68;UBERON:0002097,1.76e-12,41;UBERON:0007500,2.98e-12,59;UBERON:0001981,2.98e-12,59;UBERON:0004537,2.98e-12,59;UBERON:0006965,2.98e-12,59;UBERON:0002199,6.41e-12,46;UBERON:0002416,6.41e-12,46;UBERON:0003688,1.47e-11,6;UBERON:0002358,1.47e-11,6;UBERON:0003684,1.47e-11,6;UBERON:0001178,1.47e-11,6;UBERON:0002049,1.82e-11,78;UBERON:0007798,1.82e-11,78;UBERON:0001637,1.21e-10,42;UBERON:0003509,1.21e-10,42;UBERON:0004572,1.21e-10,42;UBERON:0004638,4.51e-10,18;UBERON:0001986,4.51e-10,18;UBERON:0004852,4.51e-10,18;UBERON:0000487,2.56e-09,22;UBERON:0004872,2.83e-09,83;UBERON:0004573,4.84e-09,33;UBERON:0004571,4.84e-09,33;UBERON:0000947,1.22e-08,21;UBERON:0010191,1.22e-08,21;UBERON:0006914,7.26e-08,25;UBERON:0004535,1.81e-07,109;UBERON:0001009,4.48e-07,112;UBERON:0003914,5.39e-07,117 | |||
|phase1_expression=3.45188920614058,5.78071414505655,1.83240725324762,5.00366491765652,2.23480547213644,6.97870819280295,2.53299878168311,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,1.74753097704138,0.527533956456907,0,0.994192127183747,2.01697543935533,2.41077811209591,2.92124036154949,1.95173119516203,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0.369754010166788,0,0,0,1.66198622559563,1.60435557976113,0,0,0,0,0,0,0,1.62700325833979,0,0,0.575384784644301,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0.941211697713023,0.272906150057846,0,0.918251677112708,0,0.639337125799041,0.329851300186716,0,0.426224750532694,2.90209238628584,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,1.00267582127178,1.01392563272577,0.795285947051099,0.486634870302636,0,0.665188192387692,0.087834785693126,0,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.38856200643038,1.69592382577203,0.419499436209906,0.825354125820202,2.71693456497854,1.55050055501597,0.35576626268671,0.33472061276467,2.81980521976403,2.28081631715554,1.22031028774085,2.20597848207521,4.0507097394088,1.42879565254528,0.44905874525234,0.563057402416611,0,1.89853131913626,1.46561395144326,0,0,0,6.46063537203914,0.886413581652058,1.98613771219828,2.29469296599051,0.354668382198357,0,1.06748995729705,2.4666754841716,0,0.404132016209064,0.653847612453835,0,0.576175924479999,0,0,0.570471821544449,0.298897361103602,0,0,0,0.61246251376468,0.122834317311768,0,0,5.19260551484969,0.910161361938026,0,0,0,0,0,3.0648779579902,2.25357088359895,0.794025282120147,7.17558542755448,2.34913127700424,1.90738711043606,1.80054657650641,1.44273540933814,1.03056216018252,1.11670113798954,2.70042131586026,1.85130309806277,1.51460264546469,1.65689817556139,1.2931684545505,3.19508633264953,0.604512589365842,1.18692414617341,0.193260853163297,0.818238361772504,0.286804595389004,0.121973706129595,0,0,0,0,0.36497735907583,3.12899064659632,5.78916844373597,1.38134921352481,1.85747171212792,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.804231779293047,0.370353780634118,0,0,0,0.115930404975077,0,2.7429625074604,1.38895653772983,4.18559134916116,0,0,0,0,0,0,0.503946384596579,0.567100388969546,1.16426079513703,0.581267877027924,1.15014803749563,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,2.08014873822732,0.257207374262142,0,0,0.428933980974443,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,1.08506009479894,5.8231841228626,10.1704523614382,4.73107245101804,5.15422225967938,0.902838299183157,0,0,0.664225598535437,0.184369168541703,1.04260337361699,0,0,0,0.215714200818617,0,0.303127571446259,0,0.907170879989041,3.72161711728165,9.51464234385987,5.61320188866147,1.28139149255701,5.11707249066703,5.30817939773905,2.96836132889982,0.462629081407967,0.355123450626254,0,0,0.464841513839837,0,1.60405176242628,0.184161977871793,0.574072240823034,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,1.46139224653261,0,0,1.36074964221213,1.72732732881711,1.54227252690289,0,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0.574265537996172,1.30012049207304,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0.178064071293475,0.165284915360978,0.768760269460425,1.53135254993501,0.4046311234222,0.464845549297286,1.88887408098384,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0,0,2.35484592059769,0.719489830333259,0,0,0.202182481573316,0,0.421258456238981,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,1.99031692572366,1.75380354101505,0,1.31178950409327,1.01455188481352,1.239293992399,0,0.143411352204052,0.294747123039363,1.07001315444375,0,0.422215270595328,0,0,0,0.192444225451024,0.670302275535787,0,0.282431402330337,0,0,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0.79312517629427,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,1.43246690842614,0.890894042497916,5.22173193568695,0,0,0,0,0,0,0,0,0,0,5.59871257791253,0.539210106883961,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0,0.957003479195758,1.74035427463538,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0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| |||
|short_description=p32@THBS1 | |||
}} |
Revision as of 22:56, 11 January 2014
Short description: | p32@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -8bp_to_M99425_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | P07996 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.83e-16 | 76 |
endothelial cell of vascular tree | 1.10e-13 | 24 |
skin fibroblast | 5.99e-12 | 23 |
endothelial cell | 1.05e-11 | 36 |
blood vessel endothelial cell | 4.51e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.51e-10 | 18 |
meso-epithelial cell | 1.93e-08 | 45 |
preadipocyte | 1.21e-07 | 12 |
preadipocyte of the breast | 2.17e-07 | 3 |
lining cell | 2.60e-07 | 58 |
barrier cell | 2.60e-07 | 58 |
mesodermal cell | 3.77e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.60e-14 | 68 |
skin of body | 1.76e-12 | 41 |
epithelial tube open at both ends | 2.98e-12 | 59 |
blood vessel | 2.98e-12 | 59 |
blood vasculature | 2.98e-12 | 59 |
vascular cord | 2.98e-12 | 59 |
integument | 6.41e-12 | 46 |
integumental system | 6.41e-12 | 46 |
omentum | 1.47e-11 | 6 |
peritoneum | 1.47e-11 | 6 |
abdominal cavity | 1.47e-11 | 6 |
visceral peritoneum | 1.47e-11 | 6 |
vasculature | 1.82e-11 | 78 |
vascular system | 1.82e-11 | 78 |
artery | 1.21e-10 | 42 |
arterial blood vessel | 1.21e-10 | 42 |
arterial system | 1.21e-10 | 42 |
blood vessel endothelium | 4.51e-10 | 18 |
endothelium | 4.51e-10 | 18 |
cardiovascular system endothelium | 4.51e-10 | 18 |
simple squamous epithelium | 2.56e-09 | 22 |
splanchnic layer of lateral plate mesoderm | 2.83e-09 | 83 |
systemic artery | 4.84e-09 | 33 |
systemic arterial system | 4.84e-09 | 33 |
aorta | 1.22e-08 | 21 |
aortic system | 1.22e-08 | 21 |
squamous epithelium | 7.26e-08 | 25 |
cardiovascular system | 1.81e-07 | 109 |
circulatory system | 4.48e-07 | 112 |
epithelial tube | 5.39e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.51e-09 | 5 |
myotonic disease | 1.51e-09 | 5 |
muscle tissue disease | 1.51e-09 | 5 |
myopathy | 1.51e-09 | 5 |
muscular disease | 1.51e-09 | 5 |
myotonic dystrophy | 1.51e-09 | 5 |