FFCP PHASE1:Hg19::chr15:45965901..45965911,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:45965901..45965911,+ | |||
|id=chr15:45965901..45965911,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.37e-21!42;CL:0000860!1.31e-19!45;CL:0002194!4.07e-19!63;CL:0000576!4.07e-19!63;CL:0000040!4.07e-19!63;CL:0000559!4.07e-19!63;CL:0002009!1.19e-18!65;CL:0000839!1.55e-16!70;CL:0000557!2.70e-15!71;CL:0000766!5.64e-14!76;CL:0002087!6.44e-13!119;CL:0002031!1.13e-11!124;CL:0000738!3.39e-09!140;CL:0000723!2.46e-07!436;CL:0000048!3.65e-07!430;CL:0002371!4.18e-07!591;CL:0002320!9.24e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.49e-42;33!CL:0002057;4.49e-42;33!CL:0000473;2.87e-32;39!CL:0000234;2.87e-32;39!CL:0000576;1.71e-20;48!CL:0000766;1.33e-10;69!CL:0002559;6.91e-10;5!CL:0002561;5.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-35,42;CL:0002057,1.13e-35,42;CL:0000473,4.08e-33,48;CL:0000234,4.08e-33,48;CL:0002194,1.32e-27,59;CL:0000576,1.32e-27,59;CL:0000040,1.32e-27,59;CL:0000559,1.32e-27,59;CL:0002009,1.71e-26,61;CL:0000839,5.24e-24,66;CL:0000557,1.49e-23,67;CL:0000766,1.77e-21,72;CL:0000763,3.12e-12,108;CL:0000049,3.12e-12,108;CL:0002087,3.38e-12,115;CL:0002031,2.00e-11,120;CL:0002559,3.80e-10,5;CL:0000738,2.38e-09,136;CL:0002561,3.36e-07,2;CL:0002032,5.66e-07,161;CL:0000837,5.66e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.13e-14!80;UBERON:0004765!3.20e-13!101;UBERON:0001434!3.20e-13!101;UBERON:0002390!3.66e-13!102;UBERON:0003061!3.66e-13!102;UBERON:0002204!3.82e-13!167;UBERON:0002405!8.23e-13!115;UBERON:0002193!1.85e-12!112;UBERON:0001474!2.97e-12!86;UBERON:0000926!1.35e-11!448;UBERON:0004120!1.35e-11!448;UBERON:0006603!1.35e-11!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;6.91e-10;5!UBERON:0005933;5.34e-07;2!UBERON:0005942;5.34e-07;2!UBERON:0005932;5.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.51e-22,76;UBERON:0001474,6.84e-20,82;UBERON:0002405,7.00e-20,93;UBERON:0004765,3.60e-19,90;UBERON:0001434,5.23e-18,100;UBERON:0002390,5.83e-17,98;UBERON:0003061,5.83e-17,98;UBERON:0002193,3.92e-16,108;UBERON:0002204,2.20e-13,167;UBERON:0002073,3.80e-10,5;UBERON:0005086,3.80e-10,5;UBERON:0005933,3.36e-07,2;UBERON:0005942,3.36e-07,2;UBERON:0005932,3.36e-07,2 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.37129905888014,0,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.393553906568396,0.393364276848904,0,0,0,0.6024118375565,3.32778609150109,0.0774672005803016,0,0,0,0.401088894940283,0,0,0.32389366601898,0.515151135268373,2.4717700592526,1.13362783106643,1.21292030593908,2.55671940596253,1.23350366406548,0.619412741790207,4.89077066947656,0.768482119587302,3.07426898855161,2.06847408441971,0.645484683583826,1.35426486594342,2.07066573496865,0.545812300115692,2.24723484445085,3.67300670845083,0.641858054152187,0,3.62836430205388,1.39624560335142,1.70489900213078,7.83564944297177,0.56738522469114,3.73693349397345,4.01997864410789,2.08593167368081,2.17188844705117,8.47559303686716,0.736555271975129,4.74693581161327,0.633765858935825,0.850417199860174,0.628975936525128,0.898629049171961,1.05123824989054,0.64290234678832,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.764546456250458,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0.167186495390678,0.977766799900771,0,0,0.445641827540694,0,0.664601683750863,0,0.512365278902701,0.520237390239513,0.328875809207352,0.829050053357545,0.289803085735052,0,0,0,0.339928028092699,1.14966148080576,0.34362744548263,0,0.95569624297229,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0.722878304769133,0,1.30361867064741,0,0,0,0.221729397462564,0,0.0654895377488563,0.364295288292542,0,0.649094787309367,0.696518949197069,2.12732736830184,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0.872188104285069,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.936480230490962,0.570471821544449,1.04614076386261,0.352303495931295,0,0.140450806702248,0,0.737005903870608,0.103325781175765,0,0.989067717114227,0,0,0,0.250237039743928,0.277064115484183,0,1.22595118319608,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,1.13152239773168,0,0,0,0.966304265816484,1.36373060295417,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,1.39310378409594,1.44375896333917,0.473227200159376,0,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0.329250856225877,0,0.402115889646523,0.555530670951178,0,0,0,0,0,0.721832238805369,1.85194205030644,0.190254152234598,0,0,0.984868024349589,0.702012795417713,1.0404181360211,1.87467667973554,0,0.425325291727159,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.904318131178758,0,0.099972991182057,0,0,0,0.239624855491583,0,0,1.01346914667305,1.64381058040307,0.179060963239896,0.112085143993527,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,1.60586089917446,0.315404830067869,0.117141414992713,0,0,0,0,0,0.695068915744663,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0.308419387605311,0.355123450626254,0.164254312027618,1.55776328755086,1.27831416305955,0,1.60405176242628,0.368323955743585,0.114814448164607,0.546273504020151,1.96686622439136,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0.616194468458578,0.307007349452259,0.413509717453592,0,0,0.255679882248303,0.0890320356467374,1.15699440752685,0.960950336825531,0.127612712494584,0.50578890427775,0.929691098594572,0,0,0,0,0,0.37064843820784,0.429374660225974,0,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,1.09814811894422,0.117812402345686,0,0,0,0,0.731140468893853,0,0.272999822815972,0.282810863907425,0,0,0,0.876901770507525,0.578775534266688,0,0,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,0.844430541190656,0.987884678879706,0,0,0.192444225451024,0.670302275535787,2.17781969722645,0,0.43050537267123,0,0,0.459446800413919,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0.293016358543788,0,0.891547074219827,0.284136146806413,0,0,0,0,0.140669416410513,0,0.659215496907038,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0.533034776018635,0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| |||
|short_description=p@chr15:45965901..45965911,+ | |||
}} |
Revision as of 23:22, 11 January 2014
Short description: | p@chr15:45965901..45965911, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr15:45965901..45965911, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.13e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-35 | 42 |
defensive cell | 4.08e-33 | 48 |
phagocyte | 4.08e-33 | 48 |
monopoietic cell | 1.32e-27 | 59 |
monocyte | 1.32e-27 | 59 |
monoblast | 1.32e-27 | 59 |
promonocyte | 1.32e-27 | 59 |
macrophage dendritic cell progenitor | 1.71e-26 | 61 |
myeloid lineage restricted progenitor cell | 5.24e-24 | 66 |
granulocyte monocyte progenitor cell | 1.49e-23 | 67 |
myeloid leukocyte | 1.77e-21 | 72 |
myeloid cell | 3.12e-12 | 108 |
common myeloid progenitor | 3.12e-12 | 108 |
nongranular leukocyte | 3.38e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 2.00e-11 | 120 |
hair follicle cell | 3.80e-10 | 5 |
leukocyte | 2.38e-09 | 136 |
outer root sheath cell | 3.36e-07 | 2 |
hematopoietic oligopotent progenitor cell | 5.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.66e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.51e-22 | 76 |
bone element | 6.84e-20 | 82 |
immune system | 7.00e-20 | 93 |
skeletal element | 3.60e-19 | 90 |
skeletal system | 5.23e-18 | 100 |
hematopoietic system | 5.83e-17 | 98 |
blood island | 5.83e-17 | 98 |
hemolymphoid system | 3.92e-16 | 108 |
musculoskeletal system | 2.20e-13 | 167 |
hair follicle | 3.80e-10 | 5 |
hair follicle placode | 3.80e-10 | 5 |
hair root sheath | 3.36e-07 | 2 |
hair outer root sheath | 3.36e-07 | 2 |
bulb of hair follicle | 3.36e-07 | 2 |