FFCP PHASE1:Hg19::chr17:79478506..79478548,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=71 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=144 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC018861_5end | |||
|coexpression_cluster_id=C845 | |||
|description=CAGE_peak_4_at_ACTG1_5end | |||
|id=chr17:79478506..79478548,- | |||
|ontology_enrichment_celltype=CL:0000055!3.36e-15!180;CL:0000144!7.85e-14!625;CL:0002371!1.78e-13!591;CL:0000548!1.19e-12!679;CL:0000004!1.19e-12!679;CL:0000255!1.19e-12!679;CL:0000012!4.06e-12!682;CL:0002321!4.84e-10!248;CL:0000220!6.52e-10!246;CL:0000222!1.55e-09!119;CL:0000057!6.42e-08!75;CL:0000183!8.34e-08!59;CL:0000393!9.44e-08!60;CL:0000211!9.44e-08!60;CL:0000192!6.86e-07!42;CL:0000514!6.86e-07!42;CL:0000680!9.72e-07!57;CL:0000056!9.72e-07!57;CL:0000355!9.72e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.58e-10,250;CL:0000222,8.91e-10,121;CL:0000057,4.66e-08,76;CL:0000393,1.82e-07,61;CL:0000211,1.82e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.95e-11!79;UBERON:0007798!3.95e-11!79;UBERON:0000914!7.05e-10!83;UBERON:0002329!7.05e-10!83;UBERON:0003077!7.05e-10!83;UBERON:0003059!7.05e-10!83;UBERON:0007282!7.05e-10!83;UBERON:0009618!7.05e-10!83;UBERON:0007285!7.05e-10!83;UBERON:0001981!1.17e-09!60;UBERON:0007500!1.17e-09!60;UBERON:0004537!1.17e-09!60;UBERON:0006965!1.17e-09!60;UBERON:0001637!3.57e-09!42;UBERON:0003509!3.57e-09!42;UBERON:0004572!3.57e-09!42;UBERON:0004872!4.19e-09!84;UBERON:0000055!4.91e-09!69;UBERON:0000486!1.11e-08!82;UBERON:0004290!1.35e-08!70;UBERON:0005256!5.03e-07!143;UBERON:0003914!9.56e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.14e-07;42!UBERON:0003509;8.14e-07;42!UBERON:0004572;8.14e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.02e-10,78;UBERON:0007798,1.02e-10,78;UBERON:0007503,4.89e-10,78;UBERON:0007500,3.14e-09,59;UBERON:0001981,3.14e-09,59;UBERON:0004537,3.14e-09,59;UBERON:0006965,3.14e-09,59;UBERON:0001637,4.03e-09,42;UBERON:0003509,4.03e-09,42;UBERON:0004572,4.03e-09,42;UBERON:0000926,5.03e-09,315;UBERON:0004120,5.03e-09,315;UBERON:0006603,5.03e-09,315;UBERON:0004872,6.87e-09,83;UBERON:0000055,1.50e-08,68;UBERON:0007524,1.97e-08,73;UBERON:0000486,2.29e-08,83;UBERON:0002329,2.70e-08,71;UBERON:0003059,2.70e-08,71;UBERON:0007282,2.70e-08,71;UBERON:0004290,2.70e-08,71;UBERON:0009618,2.70e-08,71;UBERON:0003077,4.36e-08,72;UBERON:0007285,4.36e-08,72;UBERON:0000490,3.08e-07,148;UBERON:0003914,4.34e-07,117 | |||
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| |||
|short_description=p4@ACTG1 | |||
}} |
Revision as of 17:59, 20 January 2014
Short description: | p4@ACTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACTG1_5end |
Coexpression cluster: | C845_Alveolar_Hair_Olfactory_Osteoblast_Endothelial_Fibroblast_Smooth |
Association with transcript: | 0bp_to_BC018861_5end |
EntrezGene: | ACTG1 |
HGNC: | 144 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.58e-10 | 250 |
mesodermal cell | 8.91e-10 | 121 |
fibroblast | 4.66e-08 | 76 |
electrically responsive cell | 1.82e-07 | 61 |
electrically active cell | 1.82e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.02e-10 | 78 |
vascular system | 1.02e-10 | 78 |
epithelial vesicle | 4.89e-10 | 78 |
epithelial tube open at both ends | 3.14e-09 | 59 |
blood vessel | 3.14e-09 | 59 |
blood vasculature | 3.14e-09 | 59 |
vascular cord | 3.14e-09 | 59 |
artery | 4.03e-09 | 42 |
arterial blood vessel | 4.03e-09 | 42 |
arterial system | 4.03e-09 | 42 |
mesoderm | 5.03e-09 | 315 |
mesoderm-derived structure | 5.03e-09 | 315 |
presumptive mesoderm | 5.03e-09 | 315 |
splanchnic layer of lateral plate mesoderm | 6.87e-09 | 83 |
vessel | 1.50e-08 | 68 |
dense mesenchyme tissue | 1.97e-08 | 73 |
multilaminar epithelium | 2.29e-08 | 83 |
somite | 2.70e-08 | 71 |
presomitic mesoderm | 2.70e-08 | 71 |
presumptive segmental plate | 2.70e-08 | 71 |
dermomyotome | 2.70e-08 | 71 |
trunk paraxial mesoderm | 2.70e-08 | 71 |
paraxial mesoderm | 4.36e-08 | 72 |
presumptive paraxial mesoderm | 4.36e-08 | 72 |
unilaminar epithelium | 3.08e-07 | 148 |
epithelial tube | 4.34e-07 | 117 |