FFCP PHASE1:Hg19::chr18:19664761..19664775,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_at_chr18:19664761..19664775,+ | |||
|id=chr18:19664761..19664775,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.64e-12!12;CL:0000417!2.64e-12!12;CL:0000668!2.64e-12!12;CL:0000414!2.64e-12!12;CL:0000412!2.64e-12!12;CL:0000182!2.64e-12!12;CL:0002178!7.60e-09!3;CL:0000223!1.38e-08!59;CL:0002563!2.08e-07!4;CL:0000313!3.01e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002563;4.21e-29;4!CL:0002253;2.37e-15;2!CL:0002231;8.17e-11;3!CL:0002076;3.91e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.16e-29,4;CL:0002253,2.05e-15,2;CL:0002231,8.17e-11,3;CL:0000223,2.57e-08,58;CL:0002076,8.88e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!6.25e-13!2;DOID:299!4.03e-11!25;DOID:2152!3.01e-07!1;DOID:305!4.97e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.15e-18!35;UBERON:0000160!1.49e-16!27;UBERON:0009854!1.21e-15!23;UBERON:0002107!9.19e-15!19;UBERON:0006925!9.19e-15!19;UBERON:0008836!9.19e-15!19;UBERON:0009497!2.34e-14!25;UBERON:0000015!2.34e-14!25;UBERON:0002423!2.34e-14!25;UBERON:0006235!2.34e-14!25;UBERON:0004161!2.34e-14!25;UBERON:0009856!1.05e-13!26;UBERON:0004921!4.88e-13!129;UBERON:0004185!4.88e-13!129;UBERON:0008835!1.23e-12!22;UBERON:0003894!1.23e-12!22;UBERON:0003929!9.41e-12!54;UBERON:0001007!1.51e-11!155;UBERON:0001555!1.51e-11!155;UBERON:0007026!1.51e-11!155;UBERON:0001155!3.68e-11!9;UBERON:0007499!5.12e-11!25;UBERON:0005057!1.46e-10!26;UBERON:0004119!2.95e-10!169;UBERON:0000925!2.95e-10!169;UBERON:0006595!2.95e-10!169;UBERON:0000059!3.76e-09!11;UBERON:0002365!1.01e-08!31;UBERON:0002330!1.01e-08!31;UBERON:0002368!1.26e-07!35;UBERON:0000949!1.72e-07!45;UBERON:0001242!2.08e-07!4;UBERON:0001262!2.08e-07!4;UBERON:0004786!2.08e-07!4;UBERON:0004808!2.08e-07!4;UBERON:0001277!2.08e-07!4;UBERON:0002135!2.35e-07!1;UBERON:0001154!2.50e-07!1;UBERON:0001153!2.50e-07!1;UBERON:0004911!3.01e-07!1;UBERON:0005911!4.64e-07!82;UBERON:0002108!7.84e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;4.21e-29;4!UBERON:0001262;4.21e-29;4!UBERON:0004786;4.21e-29;4!UBERON:0004808;4.21e-29;4!UBERON:0001277;4.21e-29;4!UBERON:0000485;4.02e-17;7!UBERON:0003929;4.02e-17;7!UBERON:0003350;4.07e-15;8!UBERON:0000160;8.27e-15;17!UBERON:0005409;9.39e-12;22!UBERON:0004921;1.87e-08;33!UBERON:0001052;2.43e-08;4!UBERON:0001007;6.34e-07;81!UBERON:0002107;6.38e-07;19!UBERON:0006925;6.38e-07;19!UBERON:0002108;6.39e-07;4!UBERON:0004907;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.16e-29,4;UBERON:0001262,3.16e-29,4;UBERON:0004786,3.16e-29,4;UBERON:0004808,3.16e-29,4;UBERON:0001277,3.16e-29,4;UBERON:0003350,3.53e-15,8;UBERON:0000160,7.89e-15,17;UBERON:0000485,1.31e-13,9;UBERON:0003929,1.91e-13,54;UBERON:0005409,1.71e-10,25;UBERON:0005911,5.80e-09,82;UBERON:0004921,8.99e-09,118;UBERON:0001052,2.26e-08,4;UBERON:0001007,3.58e-07,145;UBERON:0001555,3.58e-07,145;UBERON:0007026,3.58e-07,145;UBERON:0004907,6.04e-07,5;UBERON:0001046,6.19e-07,19;UBERON:0002107,6.57e-07,19;UBERON:0006925,6.57e-07,19;UBERON:0008836,6.57e-07,19;UBERON:0002108,6.77e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,2.82873408649161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77976734060731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7898540457178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,1.55488378577335,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0.098150233615243,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.308696632431779,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:19664761..19664775,+ | |||
}} |
Revision as of 18:43, 20 January 2014
Short description: | p@chr18:19664761..19664775, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19664761..19664775, + |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.16e-29 | 4 |
epithelial cell of large intestine | 2.05e-15 | 2 |
epithelial cell of prostate | 8.17e-11 | 3 |
endodermal cell | 2.57e-08 | 58 |
endo-epithelial cell | 8.88e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.16e-29 | 4 |
wall of intestine | 3.16e-29 | 4 |
gastrointestinal system mucosa | 3.16e-29 | 4 |
gastrointestinal system epithelium | 3.16e-29 | 4 |
intestinal epithelium | 3.16e-29 | 4 |
epithelium of mucosa | 3.53e-15 | 8 |
intestine | 7.89e-15 | 17 |
simple columnar epithelium | 1.31e-13 | 9 |
gut epithelium | 1.91e-13 | 54 |
gastrointestinal system | 1.71e-10 | 25 |
endo-epithelium | 5.80e-09 | 82 |
subdivision of digestive tract | 8.99e-09 | 118 |
rectum | 2.26e-08 | 4 |
digestive system | 3.58e-07 | 145 |
digestive tract | 3.58e-07 | 145 |
primitive gut | 3.58e-07 | 145 |
lower digestive tract | 6.04e-07 | 5 |
hindgut | 6.19e-07 | 19 |
liver | 6.57e-07 | 19 |
digestive gland | 6.57e-07 | 19 |
liver bud | 6.57e-07 | 19 |
small intestine | 6.77e-07 | 4 |