FFCP PHASE1:Hg19::chr19:40872251..40872269,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23646 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17158 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=51bp_to_ENST00000464586_5end | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_25_at_PLD3_5end | |||
|id=chr19:40872251..40872269,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.66e-20!76;CL:0000763!8.74e-20!112;CL:0000049!8.74e-20!112;CL:0000839!9.78e-20!70;CL:0002194!4.46e-18!63;CL:0000576!4.46e-18!63;CL:0000040!4.46e-18!63;CL:0000559!4.46e-18!63;CL:0000557!6.84e-18!71;CL:0002009!2.77e-17!65;CL:0002032!1.24e-10!165;CL:0000837!1.24e-10!165;CL:0000037!1.75e-10!172;CL:0000566!1.75e-10!172;CL:0000988!2.51e-09!182;CL:0000738!1.64e-08!140;CL:0000235!2.51e-08!10;CL:0002031!2.67e-08!124;CL:0002619!4.50e-08!3;CL:0002087!1.65e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000235;8.65e-71;6!CL:0002619;5.41e-36;3!CL:0000473;2.58e-09;39!CL:0000234;2.58e-09;39!CL:0000840;1.08e-08;5!CL:0000766;5.99e-08;69!CL:0000763;2.94e-07;100!CL:0000047;5.13e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.65e-71,6;CL:0002619,5.42e-36,3;CL:0002194,1.11e-26,59;CL:0000576,1.11e-26,59;CL:0000040,1.11e-26,59;CL:0000559,1.11e-26,59;CL:0002009,8.96e-26,61;CL:0000839,9.71e-24,66;CL:0000557,2.28e-23,67;CL:0000766,1.16e-21,72;CL:0000763,2.54e-19,108;CL:0000049,2.54e-19,108;CL:0002087,4.75e-13,115;CL:0002031,1.92e-12,120;CL:0002032,2.13e-12,161;CL:0000837,2.13e-12,161;CL:0000037,8.34e-12,168;CL:0000988,4.12e-11,177;CL:0000738,8.49e-11,136;CL:0000840,1.08e-08,5;CL:0001029,1.08e-08,5;CL:0000473,1.34e-08,48;CL:0000234,1.34e-08,48 | |||
|ontology_enrichment_development_v019=CL:0000049;7.88e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.92e-15!80;UBERON:0002390!1.06e-14!102;UBERON:0003061!1.06e-14!102;UBERON:0002193!1.17e-14!112;UBERON:0001474!1.87e-14!86;UBERON:0002405!4.85e-13!115;UBERON:0004765!5.08e-12!101;UBERON:0001434!5.08e-12!101;UBERON:0007023!2.86e-10!115;UBERON:0002204!4.73e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;9.17e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.85e-20,76;UBERON:0002405,1.94e-19,93;UBERON:0001474,7.21e-19,82;UBERON:0004765,4.50e-17,90;UBERON:0002193,1.57e-16,108;UBERON:0002390,1.45e-15,98;UBERON:0003061,1.45e-15,98;UBERON:0001434,3.17e-15,100;UBERON:0000029,7.68e-13,1;UBERON:0002204,1.70e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0,0,3.13481663935894,10.0407036465884,4.37878464978117,0,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0.818718450173537,0.224723484445085,0,0.641858054152187,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.21890816109487,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,3.20082107913617,7.72214074959484,5.35072184239422,0,0,0,0,0,0,0,0.352193736052904,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8922805154143,11.0496560115068,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10655907145603,0,0,0,0,0,0,0,0.321176150207399,0,2.55507742614196,0,0.614481528616916,1.56573275524691,0.333698283423817,0,0,0,0,0,0,0,4.10222901961303,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.747511887973863,0,0,1.9846640872478,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0.8453114551668,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p25@PLD3 | |||
}} |
Revision as of 23:20, 20 January 2014
Short description: | p25@PLD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_PLD3_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 51bp_to_ENST00000464586_5end |
EntrezGene: | PLD3 |
HGNC: | 17158 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.65e-71 | 6 |
adult endothelial progenitor cell | 5.42e-36 | 3 |
monopoietic cell | 1.11e-26 | 59 |
monocyte | 1.11e-26 | 59 |
monoblast | 1.11e-26 | 59 |
promonocyte | 1.11e-26 | 59 |
macrophage dendritic cell progenitor | 8.96e-26 | 61 |
myeloid lineage restricted progenitor cell | 9.71e-24 | 66 |
granulocyte monocyte progenitor cell | 2.28e-23 | 67 |
myeloid leukocyte | 1.16e-21 | 72 |
myeloid cell | 2.54e-19 | 108 |
common myeloid progenitor | 2.54e-19 | 108 |
nongranular leukocyte | 4.75e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.92e-12 | 120 |
hematopoietic oligopotent progenitor cell | 2.13e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-12 | 161 |
hematopoietic stem cell | 8.34e-12 | 168 |
hematopoietic cell | 4.12e-11 | 177 |
leukocyte | 8.49e-11 | 136 |
immature conventional dendritic cell | 1.08e-08 | 5 |
common dendritic progenitor | 1.08e-08 | 5 |
defensive cell | 1.34e-08 | 48 |
phagocyte | 1.34e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.85e-20 | 76 |
immune system | 1.94e-19 | 93 |
bone element | 7.21e-19 | 82 |
skeletal element | 4.50e-17 | 90 |
hemolymphoid system | 1.57e-16 | 108 |
hematopoietic system | 1.45e-15 | 98 |
blood island | 1.45e-15 | 98 |
skeletal system | 3.17e-15 | 100 |
lymph node | 7.68e-13 | 1 |
musculoskeletal system | 1.70e-08 | 167 |