FFCP PHASE1:Hg19::chr19:42721785..42721796,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=162989 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24450 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WXF8 | |||
|association_with_transcript=16bp_to_ENST00000336034,NM_133328,uc002osu.1,uc002osv.1,uc002osw.1,uc002osx.1_5end | |||
|coexpression_cluster_id=C3798 | |||
|description=CAGE_peak_5_at_DEDD2_5end | |||
|id=chr19:42721785..42721796,- | |||
|ontology_enrichment_celltype=CL:0002057!2.36e-26!42;CL:0000860!3.19e-25!45;CL:0000839!9.87e-24!70;CL:0000766!1.36e-23!76;CL:0000557!1.16e-20!71;CL:0002194!3.28e-20!63;CL:0000576!3.28e-20!63;CL:0000040!3.28e-20!63;CL:0000559!3.28e-20!63;CL:0002009!3.33e-19!65;CL:0000763!3.07e-16!112;CL:0000049!3.07e-16!112;CL:0000738!1.98e-14!140;CL:0002031!7.37e-14!124;CL:0000037!1.37e-11!172;CL:0000566!1.37e-11!172;CL:0002087!1.43e-11!119;CL:0002032!1.96e-11!165;CL:0000837!1.96e-11!165;CL:0000988!1.13e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-09;33!CL:0002057;1.53e-09;33!CL:0000097;4.06e-09;5!CL:0000473;7.17e-09;39!CL:0000234;7.17e-09;39!CL:0000766;3.51e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.84e-10,72;CL:0000097,4.15e-09,5;CL:0002028,4.15e-09,5;CL:0000839,1.25e-08,66;CL:0000557,1.73e-08,67;CL:0000860,3.69e-08,42;CL:0002057,3.69e-08,42;CL:0000473,4.39e-07,48;CL:0000234,4.39e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.72e-18!80;UBERON:0002390!6.52e-17!102;UBERON:0003061!6.52e-17!102;UBERON:0002193!6.90e-16!112;UBERON:0001474!1.02e-15!86;UBERON:0002405!4.32e-14!115;UBERON:0004765!1.72e-11!101;UBERON:0001434!1.72e-11!101;UBERON:0007023!2.38e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;8.62e-12;1!UBERON:0004177;6.70e-09;5!UBERON:0005057;6.70e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,8.62e-12,1;UBERON:0002405,3.13e-09,93;UBERON:0002390,1.08e-08,98;UBERON:0003061,1.08e-08,98;UBERON:0002193,9.22e-08,108;UBERON:0002371,2.21e-07,76;UBERON:0001474,8.88e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,2.16794459626573,0.575384784644301,0.256160706529101,0.709446689665756,3.10271112662957,5.80936215225443,1.35426486594342,0.188242339542605,0.545812300115692,0.898893937780338,0.918251677112708,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,1.86846674698672,1.50749199154046,0,0.868755378820466,0,0,0.949387162322653,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.476981248610684,1.14398982156026,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,4.14656231081544,0.864719720501769,5.42842463733434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,5.87333766392017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.0962221127255121,0,1.08890984861323,6.21349085126742,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,1.79323189425963,0,0,0,0.861593638227486,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0.219385397153973,0,0.278847488557207,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,0.17472666824203,0,0.0967563312890851,0,0,0.290967049465258,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,5.30027555648885,0,0.13223260174269,0,0,0.961086713109252,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.554645257684261,0.372578417648301,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.295712172434091,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0.111231401892069,0.706437835654626,0,0.280272163313789,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0.219881033490858,0,0.0771741581079447,0,0.940634592723046,0,0,0,0,0,0,0,1.80482086326016,0,0,0.352894871715692,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,1.10273879441814,0,0.0757786982182394,0.535928260312357,0,0.310298987585686,0.426467963801962,0,0,3.72448285775147,0,0.381882949668989,0,0,0,0.5388164241167,1.36272190246085,0.665320713092027,0,0,0,0,0,0.366724332548599,0,7.32332451604064,0.603821380773079,0 | |||
|short_description=p5@DEDD2 | |||
}} |
Revision as of 23:34, 20 January 2014
Short description: | p5@DEDD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DEDD2_5end |
Coexpression cluster: | C3798_vagina_Mast_liver_breast_CD14_thymus_heart |
Association with transcript: | 16bp_to_ENST00000336034, NM_133328, uc002osu.1, uc002osv.1, uc002osw.1, uc002osx.1_5end |
EntrezGene: | DEDD2 |
HGNC: | 24450 |
UniProt: | Q8WXF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.84e-10 | 72 |
mast cell | 4.15e-09 | 5 |
basophil mast progenitor cell | 4.15e-09 | 5 |
myeloid lineage restricted progenitor cell | 1.25e-08 | 66 |
granulocyte monocyte progenitor cell | 1.73e-08 | 67 |
classical monocyte | 3.69e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-08 | 42 |
defensive cell | 4.39e-07 | 48 |
phagocyte | 4.39e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
vagina | 8.62e-12 | 1 |
immune system | 3.13e-09 | 93 |
hematopoietic system | 1.08e-08 | 98 |
blood island | 1.08e-08 | 98 |
hemolymphoid system | 9.22e-08 | 108 |
bone marrow | 2.21e-07 | 76 |
bone element | 8.88e-07 | 82 |