FFCP PHASE1:Hg19::chr2:43359692..43359706,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_at_chr2:43359692..43359706,- | |||
|id=chr2:43359692..43359706,- | |||
|ontology_enrichment_celltype=CL:0000791!1.36e-40!18;CL:0000789!1.36e-40!18;CL:0002420!1.36e-40!18;CL:0002419!1.36e-40!18;CL:0000790!1.36e-40!18;CL:0000084!1.49e-31!25;CL:0000827!1.49e-31!25;CL:0000625!3.58e-30!11;CL:0000838!2.06e-17!52;CL:0000542!5.65e-17!53;CL:0000051!5.65e-17!53;CL:0002087!6.90e-12!119;CL:0000738!1.11e-10!140;CL:0000624!3.27e-10!6;CL:0000037!2.27e-09!172;CL:0000566!2.27e-09!172;CL:0000842!3.27e-09!3;CL:0000988!2.10e-08!182;CL:0002031!2.72e-08!124;CL:0002032!9.96e-08!165;CL:0000837!9.96e-08!165;CL:0000224!5.54e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000625;3.66e-52;11!CL:0000791;1.52e-38;18!CL:0000789;1.52e-38;18!CL:0002419;1.52e-38;18!CL:0000084;4.47e-33;25!CL:0000226;1.05e-10;3!CL:0000842;1.05e-10;3!CL:0000542;1.63e-08;53!CL:0002127;2.74e-08;1!CL:0000911;2.74e-08;1!CL:0000814;2.74e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.35e-52,11;CL:0000791,1.35e-38,18;CL:0000789,1.35e-38,18;CL:0002420,1.35e-38,18;CL:0002419,1.35e-38,18;CL:0000790,1.35e-38,18;CL:0000084,4.41e-33,25;CL:0000827,4.41e-33,25;CL:0000838,6.54e-15,52;CL:0000542,1.36e-14,53;CL:0000051,1.36e-14,53;CL:0000226,1.11e-10,3;CL:0000842,1.11e-10,3;CL:0002127,3.79e-08,1;CL:0000914,3.79e-08,1;CL:0000911,3.79e-08,1;CL:0000814,3.79e-08,1;CL:0002042,3.79e-08,1;CL:0002039,3.79e-08,1;CL:0002040,3.79e-08,1;CL:0002041,3.79e-08,1;CL:0002087,4.01e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-38;18!CL:0000051;1.63e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.44e-13!7;UBERON:0002370!1.48e-11!4;UBERON:0005058!1.48e-11!4;UBERON:0009113!1.48e-11!4;UBERON:0003295!1.48e-11!4;UBERON:0005562!1.48e-11!4;UBERON:0000178!1.16e-10!15;UBERON:0000179!1.16e-10!15;UBERON:0000463!1.16e-10!15;UBERON:0003408!3.21e-09!10;UBERON:0000974!3.90e-09!10;UBERON:0003351!1.11e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.75e-16;2!UBERON:0005058;7.75e-16;2!UBERON:0009113;7.75e-16;2!UBERON:0000178;1.14e-11;15!UBERON:0000179;1.14e-11;15!UBERON:0000463;1.14e-11;15!UBERON:0002390;5.21e-09;32!UBERON:0000029;1.42e-08;1!UBERON:0002193;6.93e-07;42!UBERON:0004177;7.60e-07;5!UBERON:0005057;7.60e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.71e-17,4;UBERON:0005058,7.71e-17,4;UBERON:0009113,7.71e-17,4;UBERON:0003295,7.71e-17,4;UBERON:0005562,7.71e-17,4;UBERON:0000178,1.10e-11,15;UBERON:0000179,1.10e-11,15;UBERON:0000463,1.10e-11,15;UBERON:0003351,2.07e-11,6;UBERON:0004177,7.50e-10,7;UBERON:0005057,7.50e-10,7;UBERON:0000029,1.27e-08,1;UBERON:0000974,4.95e-07,10;UBERON:0003408,4.95e-07,10;UBERON:0001042,4.95e-07,10;UBERON:0009145,4.95e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0,0.647787332037959,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,0.205601498999509,0,0.32592226663359,1.4203434172042,3.89653456815823,0,0,0.221533894583621,0,0,0,0,0,0,1.33457906845854,3.74557159325598,5.22677619024884,0,0.383220493601921,0.68725489096526,1.51811815211702,4.45991580053735,5.20866763085135,5.70271226669025,2.10805166708882,3.07167866770604,2.49861453104692,1.89421801635213,0.821127996921047,1.81446068902259,0.802320587350522,6.22744936696036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,2.15714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,1.90585420366231,1.64544909234478,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.785201868921944,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,1.54348316215889,0.437119121007915,0,0,0,0,0,0,0,0.375935671919414,0.773494655682926,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,2.32520075409622,9.93195428733726,0,0,0,0,0,0.5388164241167,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,1.61019034872821,0 | |||
|short_description=p@chr2:43359692..43359706,- | |||
}} |
Revision as of 02:49, 21 January 2014
Short description: | p@chr2:43359692..43359706, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43359692..43359706, - |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.35e-52 | 11 |
mature alpha-beta T cell | 1.35e-38 | 18 |
alpha-beta T cell | 1.35e-38 | 18 |
immature T cell | 1.35e-38 | 18 |
mature T cell | 1.35e-38 | 18 |
immature alpha-beta T cell | 1.35e-38 | 18 |
T cell | 4.41e-33 | 25 |
pro-T cell | 4.41e-33 | 25 |
lymphoid lineage restricted progenitor cell | 6.54e-15 | 52 |
lymphocyte | 1.36e-14 | 53 |
common lymphoid progenitor | 1.36e-14 | 53 |
single nucleate cell | 1.11e-10 | 3 |
mononuclear cell | 1.11e-10 | 3 |
innate effector T cell | 3.79e-08 | 1 |
immature NK T cell | 3.79e-08 | 1 |
effector T cell | 3.79e-08 | 1 |
mature NK T cell | 3.79e-08 | 1 |
immature NK T cell stage IV | 3.79e-08 | 1 |
immature NK T cell stage I | 3.79e-08 | 1 |
immature NK T cell stage II | 3.79e-08 | 1 |
immature NK T cell stage III | 3.79e-08 | 1 |
nongranular leukocyte | 4.01e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.71e-17 | 4 |
hemolymphoid system gland | 7.71e-17 | 4 |
thymic region | 7.71e-17 | 4 |
pharyngeal gland | 7.71e-17 | 4 |
thymus primordium | 7.71e-17 | 4 |
blood | 1.10e-11 | 15 |
haemolymphatic fluid | 1.10e-11 | 15 |
organism substance | 1.10e-11 | 15 |
pharyngeal epithelium | 2.07e-11 | 6 |
hemopoietic organ | 7.50e-10 | 7 |
immune organ | 7.50e-10 | 7 |
lymph node | 1.27e-08 | 1 |
neck | 4.95e-07 | 10 |
gland of gut | 4.95e-07 | 10 |
chordate pharynx | 4.95e-07 | 10 |
pharyngeal region of foregut | 4.95e-07 | 10 |