FFCP PHASE1:Hg19::chr2:74780119..74780126,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84695 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13869 | |||
|TSSclassifier=strong | |||
|UniProt=E7END4 | |||
|association_with_transcript=84bp_to_ENST00000409549,uc010ffm.1_5end | |||
|description=CAGE_peak_20_at_LOXL3_5end | |||
|id=chr2:74780119..74780126,- | |||
|ontology_enrichment_celltype=CL:0000667!3.05e-24!6;CL:0000058!3.05e-24!6;CL:0000138!3.05e-24!6;CL:0000153!6.09e-16!9;CL:0000447!6.09e-16!9;CL:0002334!1.63e-14!12;CL:0000327!5.33e-10!14;CL:0002583!1.97e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000081;6.49e-13;11!CL:0000138;7.17e-07;6!CL:0002569;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,6.49e-13,11;CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6;CL:0002569,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1115!5.38e-09!20 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:1115;1.21e-07;20!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:1115,1.25e-07,20;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.61e-34;1!UBERON:0002331;4.24e-14;10!UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3!UBERON:0001474;2.17e-08;18!UBERON:0003422;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.61e-34,1;UBERON:0002331,4.24e-14,10;UBERON:0000358,4.24e-14,10;UBERON:0000307,4.24e-14,10;UBERON:0000091,4.24e-14,10;UBERON:0000087,4.24e-14,10;UBERON:0007010,4.24e-14,10;UBERON:0007806,4.24e-14,10;UBERON:0008780,4.24e-14,10;UBERON:0005728,4.24e-14,10;UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3;UBERON:0003422,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.305653622991805,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.35142424497814,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14803795450051,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0.468334905806882,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09234565662625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p20@LOXL3 | |||
}} |
Revision as of 04:02, 21 January 2014
Short description: | p20@LOXL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_LOXL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENST00000409549, uc010ffm.1_5end |
EntrezGene: | LOXL3 |
HGNC: | 13869 |
UniProt: | E7END4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 6.49e-13 | 11 |
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
mesenchymal stem cell of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.61e-34 | 1 |
umbilical cord | 4.24e-14 | 10 |
blastocyst | 4.24e-14 | 10 |
blastula | 4.24e-14 | 10 |
bilaminar disc | 4.24e-14 | 10 |
inner cell mass | 4.24e-14 | 10 |
cleaving embryo | 4.24e-14 | 10 |
connecting stalk | 4.24e-14 | 10 |
inner cell mass derived epiblast | 4.24e-14 | 10 |
extraembryonic mesoderm | 4.24e-14 | 10 |
cartilage tissue | 1.85e-12 | 3 |
skeletal tissue | 1.85e-12 | 3 |
mesenchyme of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
sarcoma | 1.25e-07 | 20 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |