UBERON:0007806
From FANTOM5_SSTAR
| Name: | connecting stalk | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A bridge of mesoderm connecting the caudal end of the young embryo with the trophoblastic tissues; the precursor of the umbilical cord." [Medical_Dictionary:http://medical-dictionary.thefreedictionary.com/] | ||
| Xrefs: |
| ||
| Comments: | todo - this is currently defined as a bridge of mesoderm, but in EHDAA2 is extraembryonic structure split into mesoderm and blood vessels |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000478(extraembryonic structure),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0005728(extraembryonic mesoderm) |
Children
| develops from: | UBERON:0002331 (umbilical cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007806 (connecting stalk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.79e-79 | FFCP PHASE2:Hg19::chr7:135931480..135931486,+#_14bb33615039afdf9052037a7d91f708 | p@chr7:135931480..135931486, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr10:120921270..120921282,-#_14bb33615039afdf9052037a7d91f708 | p@chr10:120921270..120921282, - |
| 5.79e-79 | FFCP PHASE1:Hg19::chr7:135931480..135931486,+#_14bb33615039afdf9052037a7d91f708 | p@chr7:135931480..135931486, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr10:120921270..120921282,-#_14bb33615039afdf9052037a7d91f708 | p@chr10:120921270..120921282, - |
| 2.16e-63 | FFCP PHASE1:Hg19::chr1:205744117..205744127,-#_f6db00c50a1cf20f61c2f87d1ff10a42 | p8@RAB7L1 |
| 2.16e-63 | FFCP PHASE2:Hg19::chr1:205744117..205744127,-#_f6db00c50a1cf20f61c2f87d1ff10a42 | p8@RAB7L1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:119281371..119281382,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:119281371..119281382, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167748986..167748989,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167748986..167748989, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:40074306..40074328,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:40074306..40074328, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:75002215..75002221,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:75002215..75002221, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr20:22771662..22771675,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr20:22771662..22771675, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:31524425..31524444,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:31524425..31524444, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr20:39574012..39574015,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr20:39574012..39574015, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:42362820..42362827,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:42362820..42362827, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167932279..167932291,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167932279..167932291, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr8:12548586..12548602,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:12548586..12548602, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:148279057..148279078,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148279057..148279078, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:172807491..172807499,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:172807491..172807499, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr14:76957754..76957760,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76957754..76957760, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:228216610..228216617,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p18@MFF |
| 1.1e-59 | FFCP PHASE1:Hg19::chr22:37484379..37484392,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr22:37484379..37484392, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:74981579..74981583,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74981579..74981583, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:207627342..207627349,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p3@CR2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:102945487..102945492,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:102945487..102945492, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:75655787..75655802,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:75655787..75655802, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:10987850..10987854,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:10987850..10987854, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:76957754..76957760,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76957754..76957760, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18180062..18180079,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18180062..18180079, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:24889813..24889821,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:24889813..24889821, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74996801..74996811,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74996801..74996811, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:195306434..195306439,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p10@APOD |
| 1.1e-59 | FFCP PHASE2:Hg19::chr15:43323789..43323811,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr15:43323789..43323811, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:22771722..22771733,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr20:22771722..22771733, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:484706..484722,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:484706..484722, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167982726..167982736,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167982726..167982736, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:11264766..11264775,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:11264766..11264775, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:49488905..49488920,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:49488905..49488920, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr8:59790413..59790418,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:59790413..59790418, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:61574767..61574776,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:61574767..61574776, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:138023078..138023089,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:138023078..138023089, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr8:38216859..38216889,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:38216859..38216889, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:120921294..120921306,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:120921294..120921306, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:94933452..94933457,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:94933452..94933457, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr12:24889813..24889821,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:24889813..24889821, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr16:86326031..86326033,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr16:86326031..86326033, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:45954712..45954720,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p41@IGFBP3 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr12:77198556..77198565,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:77198556..77198565, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr15:43323789..43323811,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr15:43323789..43323811, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chrX:146004822..146004839,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chrX:146004822..146004839, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:120924761..120924770,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p10@SFXN4 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167957459..167957470,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167957459..167957470, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:43934923..43934932,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:43934923..43934932, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:135486309..135486312,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:135486309..135486312, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:148296759..148296767,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148296759..148296767, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:135705408..135705462,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:135705408..135705462, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:18180040..18180058,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18180040..18180058, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:88854777..88854802,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p16@CNR1 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:45926373..45926388,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:45926373..45926388, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:18603318..18603327,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:18603318..18603327, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:148284480..148284484,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148284480..148284484, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167791926..167791930,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167791926..167791930, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:168204286..168204299,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:168204286..168204299, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:53511768..53511784,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:53511768..53511784, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr14:76017349..76017357,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76017349..76017357, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:111311854..111311862,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:111311854..111311862, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:15035430..15035449,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:15035430..15035449, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:234765062..234765067,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p6@LINC00184 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:195306394..195306429,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p5@APOD |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:53510877..53510886,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p2@uc002qao.2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:76017349..76017357,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76017349..76017357, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chrX:10129363..10129369,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chrX:10129363..10129369, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:234631379..234631392,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:234631379..234631392, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18178842..18178867,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18178842..18178867, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:49488858..49488869,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:49488858..49488869, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74995205..74995211,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74995205..74995211, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:45926401..45926410,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:45926401..45926410, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167951900..167951907,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167951900..167951907, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:189266272..189266296,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:189266272..189266296, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:45063061..45063082,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:45063061..45063082, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:149464325..149464336,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:149464325..149464336, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:228216610..228216617,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p18@MFF |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:146746588..146746604,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p5@CHD1L |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:157301317..157301362,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:157301317..157301362, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:36393818..36393829,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p2@ENST00000504344 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:42682291..42682301,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:42682291..42682301, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr11:117957610..117957619,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p3@LOC100526771 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:106397647..106397655,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:106397647..106397655, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:491208..491217,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:491208..491217, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr22:20105576..20105585,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p11@RANBP1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:212870782..212870788,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:212870782..212870788, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr8:38216859..38216889,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:38216859..38216889, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:106363986..106363994,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:106363986..106363994, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr20:22771722..22771733,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr20:22771722..22771733, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:15633244..15633249,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:15633244..15633249, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:142250880..142250889,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p4@AF430683, p4@AF430684, p4@AF430685 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167938808..167938815,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167938808..167938815, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:148282641..148282654,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148282641..148282654, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr14:76957775..76957781,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76957775..76957781, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:180050773..180050786,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:180050773..180050786, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:18170731..18170736,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18170731..18170736, - |
