FFCP PHASE1:Hg19::chr2:224901052..224901054,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:224901052..224901054,- | |||
|id=chr2:224901052..224901054,- | |||
|ontology_enrichment_celltype=CL:0000057!1.68e-11!75;CL:0002620!4.12e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:1000306;8.08e-19;4!CL:0002547;8.08e-19;4!CL:0002620;3.70e-12;23!CL:0000511;2.76e-09;1!CL:0002625;2.76e-09;1!CL:0000222;2.76e-09;1!CL:0002581;2.76e-09;1!CL:0000216;2.76e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,9.44e-19,4;CL:0002547,9.44e-19,4;CL:0002620,4.82e-12,23;CL:0000057,7.18e-11,76;CL:0000511,1.32e-09,1;CL:0002625,1.32e-09,1;CL:0000216,1.32e-09,1;CL:0002581,1.69e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.85e-07;5!DOID:450;2.85e-07;5!DOID:66;2.85e-07;5!DOID:423;2.85e-07;5!DOID:0080000;2.85e-07;5!DOID:11722;2.85e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.94e-07,5;DOID:450,2.94e-07,5;DOID:66,2.94e-07,5;DOID:423,2.94e-07,5;DOID:0080000,2.94e-07,5;DOID:11722,2.94e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.97e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;8.08e-19;4!UBERON:0000415;8.08e-19;4!UBERON:0007240;8.08e-19;4!UBERON:0005742;8.08e-19;4!UBERON:0005734;8.08e-19;4!UBERON:0004664;8.08e-19;4!UBERON:0004663;8.08e-19;4!UBERON:0002097;6.83e-10;41!UBERON:0002134;8.30e-10;1!UBERON:0005208;8.30e-10;1!UBERON:0004145;8.30e-10;1!UBERON:0005946;8.30e-10;1!UBERON:0005965;8.30e-10;1!UBERON:0002078;8.30e-10;1!UBERON:0001136;2.76e-09;1!UBERON:0001343;2.76e-09;1!UBERON:0004910;2.76e-09;1!UBERON:0004813;2.76e-09;1!UBERON:0002199;2.99e-07;46!UBERON:0002416;2.99e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,6.95e-19,7;UBERON:0000415,9.44e-19,4;UBERON:0007240,9.44e-19,4;UBERON:0005742,9.44e-19,4;UBERON:0005734,9.44e-19,4;UBERON:0004664,9.44e-19,4;UBERON:0004663,9.44e-19,4;UBERON:0002097,1.73e-11,41;UBERON:0002199,4.00e-10,46;UBERON:0002416,4.00e-10,46;UBERON:0002134,7.98e-10,1;UBERON:0005208,7.98e-10,1;UBERON:0005946,7.98e-10,1;UBERON:0005965,7.98e-10,1;UBERON:0002078,7.98e-10,1;UBERON:0001136,1.32e-09,1;UBERON:0001343,1.32e-09,1;UBERON:0004910,1.32e-09,1;UBERON:0005154,1.32e-09,1;UBERON:0005295,1.32e-09,1;UBERON:0004813,1.32e-09,1;UBERON:0005297,1.32e-09,1;UBERON:0005294,1.32e-09,1;UBERON:0010141,1.32e-09,1;UBERON:0005891,1.32e-09,1 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.434539556882471,0,2.91980922181582,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.01304409331664,1.32409180813219,3.15520282823695,0,0.560677600142307,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0,0,0,0,0,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.300476117813194,0,1.07633781413317,0.640672166455702,0,1.20036438433761,0.721367704669072,0.772921620136887,0.37223371266318,2.70042131586026,1.07180705677318,1.00973509697646,0.368199594569197,0.161646056818812,2.13005755509969,0.302256294682921,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,1.43833425785268,0.179060963239896,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.60818530127658,0,0,0,0.215714200818617,0,0,0,0,0,1.07423381301644,0.561320188866147,0.640695746278505,0.511707249066704,0.804269605718038,1.48418066444991,0,0,0,0,0,0,0.601519410909855,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0.247528499761764,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0.255225424989168,0,0,1.5740617341532,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0.779160935160341,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0,0.313808538937,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,3.58936512288407,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.340776043570843,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.250381861413,0,0.332787154610557,0.124192805882767,0,0.124980407962107,2.27473676312472,0,0,0,0,0,0,0,0,1.0062716070103,0.889811221596536,0,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0.465788870628778,0.829412415681711,0.53168342911599,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0,0,0.184105950251841,0,0,0.383683113910955,0,0.786329709279482,0.109209638192014,0,0,0.619678821295011,0,0,0.315446980005013,0,0,0.6124909547064,0,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0.535701835878287,0,0,0,0.177404740325278,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0.9555033757741,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0.473328002922261,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0,0,0.18378979906969,0,0.151557396436479,0,0.829169439458779,0.103432995861895,0,0,0.129177819672012,0,0,0,0.202117188958219,0.2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| |||
|short_description=p@chr2:224901052..224901054,- | |||
}} |
Revision as of 08:56, 21 January 2014
Short description: | p@chr2:224901052..224901054, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:224901052..224901054, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 9.44e-19 | 4 |
fibroblast of the aortic adventitia | 9.44e-19 | 4 |
skin fibroblast | 4.82e-12 | 23 |
fibroblast | 7.18e-11 | 76 |
androgen binding protein secreting cell | 1.32e-09 | 1 |
seminiferous tubule epithelial cell | 1.32e-09 | 1 |
Sertoli cell | 1.32e-09 | 1 |
perirenal preadipocyte | 1.69e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 6.95e-19 | 7 |
artery wall | 9.44e-19 | 4 |
tunica adventitia of artery | 9.44e-19 | 4 |
adventitia | 9.44e-19 | 4 |
tunica adventitia of blood vessel | 9.44e-19 | 4 |
aorta tunica adventitia | 9.44e-19 | 4 |
aorta wall | 9.44e-19 | 4 |
skin of body | 1.73e-11 | 41 |
integument | 4.00e-10 | 46 |
integumental system | 4.00e-10 | 46 |
tricuspid valve | 7.98e-10 | 1 |
right atrium valve | 7.98e-10 | 1 |
outflow tract of atrium | 7.98e-10 | 1 |
outflow part of right atrium | 7.98e-10 | 1 |
right cardiac atrium | 7.98e-10 | 1 |
mesothelium | 1.32e-09 | 1 |
seminiferous tubule of testis | 1.32e-09 | 1 |
epithelium of male gonad | 1.32e-09 | 1 |
epithelial cord | 1.32e-09 | 1 |
sex cord | 1.32e-09 | 1 |
seminiferous tubule epithelium | 1.32e-09 | 1 |
testis sex cord | 1.32e-09 | 1 |
genital ridge | 1.32e-09 | 1 |
primitive sex cord of indifferent gonad | 1.32e-09 | 1 |
coelomic epithelium | 1.32e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.94e-07 | 5 |
myotonic disease | 2.94e-07 | 5 |
muscle tissue disease | 2.94e-07 | 5 |
myopathy | 2.94e-07 | 5 |
muscular disease | 2.94e-07 | 5 |
myotonic dystrophy | 2.94e-07 | 5 |