UBERON:0002078

Name:	right cardiac atrium
Namespace:	FANTOM
Definition:	"Right cardiac chamber which is continuous with the superior vena cava and inferior vena cava.[FMA]" [FMA:FMA, Wikipedia:Right_atrium]
Xrefs:	Expandlinks: AAO:0010248 BTO:0001703 EHDAA2:0000290 EMAPA:17321 FMA:7096 galen:RightAtrium [1] [ 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png] MA:0000075 ncithesaurus:Right_Atrium OpenCyc:Mx4runNcs6fqEdudWQACs5b6Bw OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rDJ89oqgPEdudWQACs5b6Bw SCTID:244383003 VHOG:0000328 XAO:0003192
Synonyms:	"atrium dextrum" RELATED LATIN [Wikipedia:Right_atrium] "cardiac right atrium" EXACT [] "heart right atrium" EXACT [] "right atrium of heart" EXACT [] "right cardiac atrium" EXACT []
Comments:	This class was created automatically from a combination of ontologies
Alt_id:	UBERON:FMA_7096-MA_0000075
Subset:	uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	UBERON:0002081(cardiac atrium),UBERON:0015212(lateral structure)

Children

part of:	UBERON:0005208 (right atrium valve),UBERON:0005965 (outflow part of right atrium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

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Human (Homo sapiens)

• 10207-103F9 (heart - tricuspid valve, adult)

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002078 (right cardiac atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
5.42e-195	FFCP PHASE2:Hg19::chr15:86272097..86272099,+	p@chr15:86272097..86272099, +
5.42e-195	FFCP PHASE2:Hg19::chr10:92678409..92678410,-	p@chr10:92678409..92678410, -
5.42e-195	FFCP PHASE1:Hg19::chr15:86272097..86272099,+	p@chr15:86272097..86272099, +
5.42e-195	FFCP PHASE1:Hg19::chr5:99390735..99390743,-	p@chr5:99390735..99390743, -
5.42e-195	FFCP PHASE2:Hg19::chr5:99390735..99390743,-	p@chr5:99390735..99390743, -
5.42e-195	FFCP PHASE1:Hg19::chr10:92678409..92678410,-	p@chr10:92678409..92678410, -
9.37e-99	FFCP PHASE2:Hg19::chr7:97501400..97501407,-	p16@ASNS
9.37e-99	FFCP PHASE1:Hg19::chr2:179656442..179656451,-	p@chr2:179656442..179656451, -
9.37e-99	FFCP PHASE2:Hg19::chr2:179656442..179656451,-	p@chr2:179656442..179656451, -
9.37e-99	FFCP PHASE1:Hg19::chr7:97501400..97501407,-	p16@ASNS
2.55e-98	FFCP PHASE2:Hg19::chr5:157747715..157747717,+	p@chr5:157747715..157747717, +
2.55e-98	FFCP PHASE2:Hg19::chr18:4003453..4003457,+	p@chr18:4003453..4003457, +
2.55e-98	FFCP PHASE2:Hg19::chr2:103287330..103287331,+	p@chr2:103287330..103287331, +
2.55e-98	FFCP PHASE1:Hg19::chr6:70647888..70647891,+	p@chr6:70647888..70647891, +
2.55e-98	FFCP PHASE1:Hg19::chr22:36000901..36000903,-	p@chr22:36000901..36000903, -
2.55e-98	FFCP PHASE2:Hg19::chrX:136514398..136514433,-	p@chrX:136514398..136514433, -
2.55e-98	FFCP PHASE1:Hg19::chr14:68375236..68375240,+	p9@RAD51B
2.55e-98	FFCP PHASE1:Hg19::chr8:24530708..24530710,+	p@chr8:24530708..24530710, +
2.55e-98	FFCP PHASE2:Hg19::chr18:39821929..39821932,+	p@chr18:39821929..39821932, +
2.55e-98	FFCP PHASE2:Hg19::chr14:68375236..68375240,+	p9@RAD51B
2.55e-98	FFCP PHASE1:Hg19::chr18:4003453..4003457,+	p@chr18:4003453..4003457, +
2.55e-98	FFCP PHASE1:Hg19::chr2:103287330..103287331,+	p@chr2:103287330..103287331, +
2.55e-98	FFCP PHASE1:Hg19::chr6:104898467..104898469,-	p@chr6:104898467..104898469, -
2.55e-98	FFCP PHASE2:Hg19::chr6:70647888..70647891,+	p@chr6:70647888..70647891, +
2.55e-98	FFCP PHASE1:Hg19::chrX:136514398..136514433,-	p@chrX:136514398..136514433, -
2.55e-98	FFCP PHASE2:Hg19::chr22:36000901..36000903,-	p@chr22:36000901..36000903, -
2.55e-98	FFCP PHASE2:Hg19::chr6:104898467..104898469,-	p@chr6:104898467..104898469, -
2.55e-98	FFCP PHASE2:Hg19::chr8:24530708..24530710,+	p@chr8:24530708..24530710, +
2.55e-98	FFCP PHASE1:Hg19::chr5:157747715..157747717,+	p@chr5:157747715..157747717, +
2.55e-98	FFCP PHASE1:Hg19::chr18:39821929..39821932,+	p@chr18:39821929..39821932, +
1.23e-66	FFCP PHASE1:Hg19::chr2:218844837..218844842,-	p@chr2:218844837..218844842, -
1.23e-66	FFCP PHASE1:Hg19::chr19:35531882..35531893,-	p@chr19:35531882..35531893, -
1.23e-66	FFCP PHASE2:Hg19::chr16:10783399..10783401,+	p@chr16:10783399..10783401, +
1.23e-66	FFCP PHASE2:Hg19::chr2:26508626..26508627,+	p@chr2:26508626..26508627, +
1.23e-66	FFCP PHASE1:Hg19::chr16:10783399..10783401,+	p@chr16:10783399..10783401, +
1.23e-66	FFCP PHASE1:Hg19::chr17:77026478..77026512,+	p@chr17:77026478..77026512, +
1.23e-66	FFCP PHASE1:Hg19::chr2:123518588..123518591,+	p@chr2:123518588..123518591, +
1.23e-66	FFCP PHASE2:Hg19::chr19:35531882..35531893,-	p@chr19:35531882..35531893, -
1.23e-66	FFCP PHASE1:Hg19::chr2:26508626..26508627,+	p@chr2:26508626..26508627, +
1.23e-66	FFCP PHASE2:Hg19::chr2:218844837..218844842,-	p@chr2:218844837..218844842, -
1.23e-66	FFCP PHASE2:Hg19::chr17:77026478..77026512,+	p@chr17:77026478..77026512, +
1.23e-66	FFCP PHASE2:Hg19::chr14:30786806..30786810,-	p@chr14:30786806..30786810, -
1.23e-66	FFCP PHASE2:Hg19::chr2:123518588..123518591,+	p@chr2:123518588..123518591, +
1.23e-66	FFCP PHASE1:Hg19::chr14:30786806..30786810,-	p@chr14:30786806..30786810, -
1.23e-66	FFCP PHASE1:Hg19::chr5:99385820..99385831,-	p@chr5:99385820..99385831, -
1.23e-66	FFCP PHASE2:Hg19::chr5:99385820..99385831,-	p@chr5:99385820..99385831, -
2.39e-66	FFCP PHASE1:Hg19::chr5:150006500..150006508,-	p@chr5:150006500..150006508, -
2.39e-66	FFCP PHASE2:Hg19::chr10:63204408..63204412,-	p@chr10:63204408..63204412, -
2.39e-66	FFCP PHASE1:Hg19::chr1:189481131..189481134,-	p@chr1:189481131..189481134, -
2.39e-66	FFCP PHASE2:Hg19::chr5:150006500..150006508,-	p@chr5:150006500..150006508, -
2.39e-66	FFCP PHASE1:Hg19::chr1:1154830..1154841,-	p@chr1:1154830..1154841, -
2.39e-66	FFCP PHASE2:Hg19::chr2:42043637..42043640,-	p@chr2:42043637..42043640, -
2.39e-66	FFCP PHASE2:Hg19::chr1:203150041..203150049,-	p@chr1:203150041..203150049, -
2.39e-66	FFCP PHASE1:Hg19::chr3:135043585..135043591,-	p@chr3:135043585..135043591, -
2.39e-66	FFCP PHASE2:Hg19::chr18:40200823..40200829,+	p@chr18:40200823..40200829, +
2.39e-66	FFCP PHASE1:Hg19::chr19:44414731..44414733,+	p@chr19:44414731..44414733, +
2.39e-66	FFCP PHASE2:Hg19::chr2:238859791..238859796,-	p@chr2:238859791..238859796, -
2.39e-66	FFCP PHASE2:Hg19::chr13:56591781..56591785,-	p@chr13:56591781..56591785, -
2.39e-66	FFCP PHASE1:Hg19::chr19:7795730..7795740,-	p5@CLEC4G
2.39e-66	FFCP PHASE1:Hg19::chr7:54897467..54897468,-	p@chr7:54897467..54897468, -
2.39e-66	FFCP PHASE2:Hg19::chr1:1154360..1154365,-	p@chr1:1154360..1154365, -
2.39e-66	FFCP PHASE1:Hg19::chr13:56591781..56591785,-	p@chr13:56591781..56591785, -
2.39e-66	FFCP PHASE1:Hg19::chr6:104465140..104465144,-	p@chr6:104465140..104465144, -
2.39e-66	FFCP PHASE1:Hg19::chr5:175084679..175084689,+	p4@HRH2
2.39e-66	FFCP PHASE2:Hg19::chr8:127508635..127508640,+	p@chr8:127508635..127508640, +
2.39e-66	FFCP PHASE2:Hg19::chr1:189481131..189481134,-	p@chr1:189481131..189481134, -
2.39e-66	FFCP PHASE2:Hg19::chr6:104465140..104465144,-	p@chr6:104465140..104465144, -
2.39e-66	FFCP PHASE2:Hg19::chr1:1154830..1154841,-	p@chr1:1154830..1154841, -
2.39e-66	FFCP PHASE1:Hg19::chr2:42043637..42043640,-	p@chr2:42043637..42043640, -
2.39e-66	FFCP PHASE1:Hg19::chr10:54464025..54464030,+	p@chr10:54464025..54464030, +
2.39e-66	FFCP PHASE2:Hg19::chr5:175084679..175084689,+	p4@HRH2
2.39e-66	FFCP PHASE1:Hg19::chr10:63204408..63204412,-	p@chr10:63204408..63204412, -
2.39e-66	FFCP PHASE1:Hg19::chr1:203150041..203150049,-	p@chr1:203150041..203150049, -
2.39e-66	FFCP PHASE2:Hg19::chr3:135043585..135043591,-	p@chr3:135043585..135043591, -
2.39e-66	FFCP PHASE1:Hg19::chr18:40200823..40200829,+	p@chr18:40200823..40200829, +
2.39e-66	FFCP PHASE2:Hg19::chr19:44414731..44414733,+	p@chr19:44414731..44414733, +
2.39e-66	FFCP PHASE1:Hg19::chr2:238859791..238859796,-	p@chr2:238859791..238859796, -
2.39e-66	FFCP PHASE1:Hg19::chr1:1154360..1154365,-	p@chr1:1154360..1154365, -
2.39e-66	FFCP PHASE2:Hg19::chr19:7795730..7795740,-	p5@CLEC4G
2.39e-66	FFCP PHASE2:Hg19::chr7:54897467..54897468,-	p@chr7:54897467..54897468, -
2.39e-66	FFCP PHASE2:Hg19::chr10:54464025..54464030,+	p@chr10:54464025..54464030, +
2.39e-66	FFCP PHASE1:Hg19::chr8:127508635..127508640,+	p@chr8:127508635..127508640, +
4.66e-66	FFCP PHASE1:Hg19::chr3:39233987..39233993,-	p14@XIRP1
4.66e-66	FFCP PHASE2:Hg19::chr9:86211495..86211499,-	p1@ENST00000362613
4.66e-66	FFCP PHASE1:Hg19::chr13:25345488..25345491,+	p@chr13:25345488..25345491, +
4.66e-66	FFCP PHASE1:Hg19::chr1:11905799..11905806,-	p@chr1:11905799..11905806, -
4.66e-66	FFCP PHASE1:Hg19::chr10:37485037..37485044,+	p@chr10:37485037..37485044, +
4.66e-66	FFCP PHASE1:Hg19::chr4:88042092..88042099,-	p@chr4:88042092..88042099, -
4.66e-66	FFCP PHASE1:Hg19::chr21:40459334..40459341,+	p@chr21:40459334..40459341, +
4.66e-66	FFCP PHASE2:Hg19::chr4:88042092..88042099,-	p@chr4:88042092..88042099, -
4.66e-66	FFCP PHASE2:Hg19::chr10:37485037..37485044,+	p@chr10:37485037..37485044, +
4.66e-66	FFCP PHASE2:Hg19::chr2:16526810..16526812,-	p@chr2:16526810..16526812, -
4.66e-66	FFCP PHASE1:Hg19::chr1:11907265..11907271,-	p9@NPPA
4.66e-66	FFCP PHASE2:Hg19::chr8:135501299..135501346,-	p@chr8:135501299..135501346, -
4.66e-66	FFCP PHASE2:Hg19::chr3:39233987..39233993,-	p14@XIRP1
4.66e-66	FFCP PHASE1:Hg19::chr9:86211495..86211499,-	p1@ENST00000362613
4.66e-66	FFCP PHASE2:Hg19::chr1:11905799..11905806,-	p@chr1:11905799..11905806, -
4.66e-66	FFCP PHASE2:Hg19::chr21:40459334..40459341,+	p@chr21:40459334..40459341, +
4.66e-66	FFCP PHASE1:Hg19::chr8:135501299..135501346,-	p@chr8:135501299..135501346, -
4.66e-66	FFCP PHASE1:Hg19::chr2:16526810..16526812,-	p@chr2:16526810..16526812, -

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