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UBERON:0002081

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Name:cardiac atrium
Namespace:FANTOM
Definition:"Cardiac chamber which consists of a wall that surrounds the cavity of an atrium.[FMA]" [FMA:FMA, Wikipedia:Heart_atrium]
Xrefs:
links:

AAO:0010246
BTO:0000903
EFO:0000277
EFO:0000314
EHDAA2:0000154
EHDAA:1265
EMAPA:16688
EV:0100019
FMA:7099
GAID:555
galen:Atrium
MA:0000073
MAT:0000496
MESH:A.07.541.358
ncithesaurus:Cardiac_Atrium
SCTID:261405004
TAO:0000471
VHOG:0000175

ZFA:0000471
Synonyms: "atria" EXACT PLURAL []
"atrial tissue" RELATED [BTO:0000903]
"atrium" EXACT [ZFA:0000471]
"atrium of heart" EXACT []
"Cardiac atria" EXACT PLURAL []
"cardiac atria" EXACT PLURAL []
"heart atrium" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_7099-MA_0000073
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004151(cardiac chamber)
develops_from:UBERON:0010227(future cardiac atrium)



Children

is a:UBERON:0002078 (right cardiac atrium),UBERON:0002079 (left cardiac atrium)
part of:UBERON:0005946 (outflow tract of atrium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002081 (cardiac atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "One of four heart chambers.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "One of two chambers of the heart which receive blood from the veins and forces it by muscular contration to the ventricle.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.