UBERON:0002081
From FANTOM5_SSTAR
Name: | cardiac atrium | |
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Namespace: | FANTOM | |
Definition: | "Cardiac chamber which consists of a wall that surrounds the cavity of an atrium.[FMA]" [FMA:FMA, Wikipedia:Heart_atrium] | |
Xrefs: |
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Synonyms: |
"atria" EXACT PLURAL [] "atrial tissue" RELATED [BTO:0000903] "atrium" EXACT [ZFA:0000471] "atrium of heart" EXACT [] "Cardiac atria" EXACT PLURAL [] "cardiac atria" EXACT PLURAL [] "heart atrium" EXACT [] | |
Comments: | This class was created automatically from a combination of ontologies | |
Alt_id: | UBERON:FMA_7099-MA_0000073 | |
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004151(cardiac chamber) |
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develops_from: | UBERON:0010227(future cardiac atrium) |
Children
is a: | UBERON:0002078 (right cardiac atrium),UBERON:0002079 (left cardiac atrium) |
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part of: | UBERON:0005946 (outflow tract of atrium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10079-102A7 (left atrium, adult, donor1)
- 10207-103F9 (heart - tricuspid valve, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002081 (cardiac atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "One of four heart chambers.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "One of two chambers of the heart which receive blood from the veins and forces it by muscular contration to the ventricle.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.