FFCP PHASE1:Hg19::chr2:235936372..235936385,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:235936372..235936385,+ | |||
|id=chr2:235936372..235936385,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.85e-19!254;CL:0002620!7.66e-16!23;CL:0000057!2.04e-14!75;CL:0000548!4.23e-14!679;CL:0000004!4.23e-14!679;CL:0000255!4.23e-14!679;CL:0000012!1.02e-13!682;CL:0000063!8.88e-13!578;CL:0000076!4.12e-11!62;CL:0000077!4.21e-10!19;CL:0002076!2.46e-09!43;CL:0000003!5.02e-09!722;CL:0000220!1.50e-08!246;CL:0002321!2.80e-08!248;CL:0000223!1.11e-07!59;CL:0002368!2.65e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.11e-17;23!CL:0002368;2.14e-08;13!CL:0000077;8.25e-08;19!CL:0000057;6.85e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.80e-17,23;CL:0000057,1.06e-12,76;CL:0000066,6.23e-11,253;CL:0000076,1.38e-10,63;CL:0002368,2.49e-08,13;CL:0000077,8.98e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.45e-14!106;DOID:0050687!1.93e-12!143;DOID:1749!4.69e-10!14;DOID:162!7.63e-09!235;DOID:14566!3.78e-08!239;DOID:7!8.32e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.18e-12;14!DOID:17;1.41e-09;5!DOID:450;1.41e-09;5!DOID:66;1.41e-09;5!DOID:423;1.41e-09;5!DOID:0080000;1.41e-09;5!DOID:11722;1.41e-09;5!DOID:7;4.10e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.96e-12,14;DOID:305,1.50e-10,106;DOID:17,1.06e-09,5;DOID:450,1.06e-09,5;DOID:66,1.06e-09,5;DOID:423,1.06e-09,5;DOID:0080000,1.06e-09,5;DOID:11722,1.06e-09,5;DOID:0050687,9.60e-09,143;DOID:7,1.60e-08,39;DOID:162,1.21e-07,235;DOID:14566,3.06e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.42e-18!95;UBERON:0002097!1.74e-13!40;UBERON:0002199!1.13e-12!45;UBERON:0002416!1.13e-12!45;UBERON:0004119!6.30e-10!169;UBERON:0000925!6.30e-10!169;UBERON:0006595!6.30e-10!169;UBERON:0001004!4.35e-09!72;UBERON:0001007!1.29e-08!155;UBERON:0001555!1.29e-08!155;UBERON:0007026!1.29e-08!155;UBERON:0000475!3.28e-08!365;UBERON:0000065!3.85e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.12e-13;41!UBERON:0002199;5.80e-11;46!UBERON:0002416;5.80e-11;46!UBERON:0003102;3.87e-10;50!UBERON:0002394;4.88e-08;4!UBERON:0003928;4.88e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.98e-16,41;UBERON:0002199,3.86e-15,46;UBERON:0002416,3.86e-15,46;UBERON:0003102,3.59e-13,99 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.704772020479856,0,0.446961094427288,0,0,1.89515962028049,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,3.28050004567315,0,1.1409436430889,0.448346041655403,0.469737994575059,1.94247533241758,0.421352420106746,0,0,0.309977343527296,2.37600571456411,2.71993622206413,0.910161361938026,2.15585442544872,0.505008341862199,0,0.831192346452549,4.38977620880838,15.017901994152,3.00476117813194,0.226864366320042,3.40840307808838,2.56268866582281,4.4505699243508,4.50136644126603,1.95799805553034,5.15281080091258,1.67505170698431,2.53164498361899,0.974370051611986,2.77677151668526,4.97069452668416,0.484938170456436,3.55009592516614,5.03760491138201,3.56077243852024,0.386521706326594,0.818238361772504,0.860413786167011,0,0,0,0,0,0,3.12899064659632,1.28648187638577,0,0,0,0.473227200159376,1.01150814046861,0.723033089650446,0.772057809126758,0.653638332277218,0,0.404493924480493,0.98110732562673,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,14.6122279234905,1.10581869652794,0.277765335475589,3.9096996637239,0,0,0.231860809950154,0.352226082707465,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0,0,0,3.4214489204541,0,0,0,0,0,0,1.29271715757778,0,0.845302752556,0,0,0,0,0.799266537048298,0,0,0,0,0,0,0.904318131178758,3.48613383440118,0.899756920638513,0,0,0,0.718874566474748,0,0,0.434343920002738,0,6.26713371339634,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0.813795071099207,0.415941723061614,0.892144943985809,0.157702415033935,0.234282829985426,0.300946099727719,0,0,1.32845119707087,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,2.72918588600655,1.38115775959256,0.841980283299221,2.17836553734692,0,0.64341568457443,0,0.308419387605311,0,1.64254312027618,0,0.348631135379878,0,0.40101294060657,4.9723734025384,0.34444334449382,0,0,0.902399225814824,0.385076685522074,0,0,0,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,1.64340221096607,0,0.614014698904518,0.137836572484531,0.537101224341368,0.145016693914229,0.426133137080504,0.890320356467374,4.79326254546837,2.30628080838127,0.765676274967505,8.49725359186619,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0.272999822815972,0.989838023675989,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,2.21310859268678,1.34060455107157,4.3556393944529,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,3.45056985571008,0,0,0,0,0,2.0453736500431,0,1.86623752597084,6.20091622916555,18.9762445156146,0,0,0,0,0,0,0,3.9064164162785,2.27395999990109,0,0.341380344856499,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0.10893846351899,9.20196712238782,0,1.82307289355202,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08728009223433,0,0,0,0,0,0,0,1.32930774541437,0.330991955875499,3.13932918407225,1.19472429772959,0,0.138674673013139,0.173559738335131,2.84177952501695,3.3082498500553,0.34945333648406,0,0.0967563312890851,0.292357268344742,0.328461828212837,0,0,0,0.548167698587004,0,0,0,2.56508224804908,0,0.599428828746391,0.432271251462318,0,0.343189995723929,3.31326035372744,0.49701014226173,6.83512700388707,0.543616824294456,0.732219924186332,0.101998217636322,3.46740707881823,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0,0.179287339332845,9.40384466865282,0,0,0,0,0,0,0,0,1.02232813071253,0,0.58620893471233,0,0,0,6.84347351537318,0,0,0,0,0,0,0,7.66009509324218,0,0.2506898940227,0,0,3.61224421375539,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0.447764408660622,2.80455971816669,0.554805861502613,0.189403005275089,0,0.889811221596536,3.20376095755693,0.907385542579434,0,0,0.318593534327405,0.899606224327209,0,0,0,0.521745061811734,0.150257608997218,1.14241563650639,1.22061219961398,0,0.107410557042488,0,0.398095888698616,8.00055529326307,0.686791410365586,0.336749488765919,0,0,0.643324774124777,10.1787773866433,8.16141331844181,1.15761237161917,3.67105056759701,1.79088841081487,1.23520578864389,1.09642024789354,1.59020231351293,0.964570191354574,0.337884881306145,0.256241518587947,0.34543034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| |||
|short_description=p@chr2:235936372..235936385,+ | |||
}} |
Revision as of 09:21, 21 January 2014
Short description: | p@chr2:235936372..235936385, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:235936372..235936385, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.80e-17 | 23 |
fibroblast | 1.06e-12 | 76 |
epithelial cell | 6.23e-11 | 253 |
squamous epithelial cell | 1.38e-10 | 63 |
respiratory epithelial cell | 2.49e-08 | 13 |
mesothelial cell | 8.98e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.98e-16 | 41 |
integument | 3.86e-15 | 46 |
integumental system | 3.86e-15 | 46 |
surface structure | 3.59e-13 | 99 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.96e-12 | 14 |
carcinoma | 1.50e-10 | 106 |
musculoskeletal system disease | 1.06e-09 | 5 |
myotonic disease | 1.06e-09 | 5 |
muscle tissue disease | 1.06e-09 | 5 |
myopathy | 1.06e-09 | 5 |
muscular disease | 1.06e-09 | 5 |
myotonic dystrophy | 1.06e-09 | 5 |
cell type cancer | 9.60e-09 | 143 |
disease of anatomical entity | 1.60e-08 | 39 |
cancer | 1.21e-07 | 235 |
disease of cellular proliferation | 3.06e-07 | 239 |