FFCP PHASE1:Hg19::chr20:31097697..31097710,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_AK097865_5end | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_3_at_AK097865_5end | |||
|id=chr20:31097697..31097710,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.30e-42!18;CL:0000789!7.30e-42!18;CL:0002420!7.30e-42!18;CL:0002419!7.30e-42!18;CL:0000790!7.30e-42!18;CL:0000084!7.46e-34!25;CL:0000827!7.46e-34!25;CL:0000625!1.29e-23!11;CL:0000838!3.54e-21!52;CL:0000542!1.07e-20!53;CL:0000051!1.07e-20!53;CL:0000624!1.08e-16!6;CL:0002087!2.24e-12!119;CL:0000738!6.84e-11!140;CL:0002031!2.41e-09!124;CL:0000815!5.31e-09!2;CL:0000792!5.31e-09!2;CL:0002677!5.31e-09!2;CL:0000037!9.13e-09!172;CL:0000566!9.13e-09!172;CL:0000988!5.54e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.32e-18;11!CL:0000084;1.89e-14;25!CL:0000791;1.19e-11;18!CL:0000789;1.19e-11;18!CL:0002419;1.19e-11;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.20e-19,11;CL:0000084,1.70e-14,25;CL:0000827,1.70e-14,25;CL:0000791,9.59e-12,18;CL:0000789,9.59e-12,18;CL:0002420,9.59e-12,18;CL:0002419,9.59e-12,18;CL:0000790,9.59e-12,18;CL:0000838,3.68e-07,52;CL:0000542,4.96e-07,53;CL:0000051,4.96e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.84e-10!4;UBERON:0005058!3.84e-10!4;UBERON:0009113!3.84e-10!4;UBERON:0003295!3.84e-10!4;UBERON:0005562!3.84e-10!4;UBERON:0004177!1.47e-09!7;UBERON:0003351!6.88e-07!6;UBERON:0000178!9.99e-07!15;UBERON:0000179!9.99e-07!15;UBERON:0000463!9.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.03e-45;2!UBERON:0005058;2.03e-45;2!UBERON:0009113;2.03e-45;2!UBERON:0004177;7.23e-19;5!UBERON:0005057;7.23e-19;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.63e-23,4;UBERON:0005058,2.63e-23,4;UBERON:0009113,2.63e-23,4;UBERON:0003295,2.63e-23,4;UBERON:0005562,2.63e-23,4;UBERON:0003351,6.71e-16,6;UBERON:0004177,8.94e-14,7;UBERON:0005057,8.94e-14,7;UBERON:0000974,6.20e-10,10;UBERON:0003408,6.20e-10,10;UBERON:0001042,6.20e-10,10;UBERON:0009145,6.20e-10,10;UBERON:0006562,4.08e-09,11;UBERON:0009722,4.08e-09,11;UBERON:0007690,4.08e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0.946895611469467,0,0,0.294605907474837,0.664601683750863,0.270803863765016,0,0,0.493313713811028,0,0,0.741432815810302,1.07016331235885,1.04535523804977,0,0,0.34362744548263,0.253019692019503,0.637130828648193,0,1.90090408889675,1.50575119077773,1.53583933385302,0,0.473554504088034,0.821127996921047,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.952927101831156,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00225620491619,3.28995985768047,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@AK097865 | |||
}} |
Revision as of 10:46, 21 January 2014
Short description: | p3@AK097865 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK097865_5end |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | -51bp_to_AK097865_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.20e-19 | 11 |
T cell | 1.70e-14 | 25 |
pro-T cell | 1.70e-14 | 25 |
mature alpha-beta T cell | 9.59e-12 | 18 |
alpha-beta T cell | 9.59e-12 | 18 |
immature T cell | 9.59e-12 | 18 |
mature T cell | 9.59e-12 | 18 |
immature alpha-beta T cell | 9.59e-12 | 18 |
lymphoid lineage restricted progenitor cell | 3.68e-07 | 52 |
lymphocyte | 4.96e-07 | 53 |
common lymphoid progenitor | 4.96e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.63e-23 | 4 |
hemolymphoid system gland | 2.63e-23 | 4 |
thymic region | 2.63e-23 | 4 |
pharyngeal gland | 2.63e-23 | 4 |
thymus primordium | 2.63e-23 | 4 |
pharyngeal epithelium | 6.71e-16 | 6 |
hemopoietic organ | 8.94e-14 | 7 |
immune organ | 8.94e-14 | 7 |
neck | 6.20e-10 | 10 |
gland of gut | 6.20e-10 | 10 |
chordate pharynx | 6.20e-10 | 10 |
pharyngeal region of foregut | 6.20e-10 | 10 |
pharynx | 4.08e-09 | 11 |
entire pharyngeal arch endoderm | 4.08e-09 | 11 |
early pharyngeal endoderm | 4.08e-09 | 11 |