FFCP PHASE1:Hg19::chr22:26879734..26879784,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15844 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQG7,F1LLU8 | |||
|association_with_transcript=0bp_to_ENST00000336873,ENST00000398145,ENST00000422379_5end | |||
|description=CAGE_peak_1_at_HPS4_5end | |||
|id=chr22:26879734..26879784,- | |||
|ontology_enrichment_celltype=CL:0000037!8.95e-17!172;CL:0000566!8.95e-17!172;CL:0002031!1.31e-16!124;CL:0000738!1.96e-16!140;CL:0000542!2.34e-16!53;CL:0000051!2.34e-16!53;CL:0000988!3.81e-16!182;CL:0000838!4.45e-16!52;CL:0002087!9.84e-15!119;CL:0002032!1.40e-14!165;CL:0000837!1.40e-14!165;CL:0000236!2.71e-09!14;CL:0000945!1.37e-08!24;CL:0000826!1.37e-08!24;CL:0000791!3.16e-08!18;CL:0000789!3.16e-08!18;CL:0002420!3.16e-08!18;CL:0002419!3.16e-08!18;CL:0000790!3.16e-08!18;CL:0000084!1.64e-07!25;CL:0000827!1.64e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.98e-10;53!CL:0000236;4.10e-09;13!CL:0000945;1.12e-08;24!CL:0000791;2.44e-08;18!CL:0000789;2.44e-08;18!CL:0002419;2.44e-08;18!CL:0000084;1.36e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.08e-19,120;CL:0000037,5.59e-19,168;CL:0000738,7.16e-19,136;CL:0000988,1.71e-18,177;CL:0002087,3.10e-17,115;CL:0002032,1.19e-16,161;CL:0000837,1.19e-16,161;CL:0000542,2.34e-16,53;CL:0000051,2.34e-16,53;CL:0000838,4.45e-16,52;CL:0000236,2.71e-09,14;CL:0000945,1.37e-08,24;CL:0000826,1.37e-08,24;CL:0000791,3.16e-08,18;CL:0000789,3.16e-08,18;CL:0002420,3.16e-08,18;CL:0002419,3.16e-08,18;CL:0000790,3.16e-08,18;CL:0000084,1.64e-07,25;CL:0000827,1.64e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;1.98e-10;53!CL:0000790;2.44e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@HPS4 | |||
}} |
Revision as of 15:02, 21 January 2014
Short description: | p1@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPS4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336873, ENST00000398145, ENST00000422379_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | Q9NQG7F1LLU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.08e-19 | 120 |
hematopoietic stem cell | 5.59e-19 | 168 |
leukocyte | 7.16e-19 | 136 |
hematopoietic cell | 1.71e-18 | 177 |
nongranular leukocyte | 3.10e-17 | 115 |
hematopoietic oligopotent progenitor cell | 1.19e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-16 | 161 |
lymphocyte | 2.34e-16 | 53 |
common lymphoid progenitor | 2.34e-16 | 53 |
lymphoid lineage restricted progenitor cell | 4.45e-16 | 52 |
B cell | 2.71e-09 | 14 |
lymphocyte of B lineage | 1.37e-08 | 24 |
pro-B cell | 1.37e-08 | 24 |
mature alpha-beta T cell | 3.16e-08 | 18 |
alpha-beta T cell | 3.16e-08 | 18 |
immature T cell | 3.16e-08 | 18 |
mature T cell | 3.16e-08 | 18 |
immature alpha-beta T cell | 3.16e-08 | 18 |
T cell | 1.64e-07 | 25 |
pro-T cell | 1.64e-07 | 25 |