FFCP PHASE1:Hg19::chr22:33255990..33256024,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt=Q14867 | |||
|association_with_transcript=396bp_to_X77690_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_X77690_5end | |||
|id=chr22:33255990..33256024,- | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-11!180;CL:0000057!1.82e-10!75;CL:0002334!1.14e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.59e-17;12!CL:0000349;1.34e-09;19!CL:0002620;1.75e-07;23!CL:0000136;2.69e-07;13!CL:0002541;7.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.74e-18,12;CL:0000057,1.80e-14,76;CL:0000136,1.20e-09,15;CL:0000349,1.29e-09,19;CL:0002620,3.20e-07,23;CL:0002541,7.37e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.17e-08;5!DOID:450;3.17e-08;5!DOID:66;3.17e-08;5!DOID:423;3.17e-08;5!DOID:0080000;3.17e-08;5!DOID:11722;3.17e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.55e-08,5;DOID:450,4.55e-08,5;DOID:66,4.55e-08,5;DOID:423,4.55e-08,5;DOID:0080000,4.55e-08,5;DOID:11722,4.55e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004923!5.08e-12!57;UBERON:0005631!4.61e-09!14;UBERON:0000158!4.61e-09!14;UBERON:0003102!4.91e-08!95;UBERON:0002199!3.66e-07!45;UBERON:0002416!3.66e-07!45;UBERON:0003124!6.26e-07!7;UBERON:0000475!6.51e-07!365;UBERON:0000468!8.03e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.79e-11;9!UBERON:0000042;8.79e-11;9!UBERON:0000478;3.37e-10;24!UBERON:0001013;5.02e-10;14!UBERON:0003688;8.09e-10;6!UBERON:0002358;8.09e-10;6!UBERON:0003684;8.09e-10;6!UBERON:0001178;8.09e-10;6!UBERON:0005631;8.56e-09;10!UBERON:0000158;8.56e-09;10!UBERON:0001987;2.25e-07;4!UBERON:0003124;7.40e-07;3!UBERON:0000920;7.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.27e-14,14;UBERON:0000158,3.27e-14,14;UBERON:0004923,2.30e-13,66;UBERON:0003124,1.46e-12,7;UBERON:0000478,3.27e-10,24;UBERON:0001013,6.04e-10,14;UBERON:0003688,6.34e-10,6;UBERON:0002358,6.34e-10,6;UBERON:0003684,6.34e-10,6;UBERON:0001178,6.34e-10,6;UBERON:0004457,1.35e-09,12;UBERON:0000042,1.35e-09,12;UBERON:0002199,7.67e-09,46;UBERON:0002416,7.67e-09,46;UBERON:0001987,2.25e-07,4;UBERON:0004340,2.25e-07,4;UBERON:0000920,7.37e-07,3 | |||
|phase1_expression=4.36028110249336,1.71280419112787,2.53717927372748,3.00219895059391,2.23480547213644,6.10636966870258,2.53299878168311,3.15859936713415,0.261185628199839,0.245733936501509,0,3.71350332621293,0.791300934685361,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.44575660953827,0,0.434539556882471,0,2.91980922181582,0.0945348171640679,0.665188192387692,0.263504357079378,0.851363990735132,0.364295288292542,0,0.97364218096405,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,4.96971951695318,0.12663051166458,1.85372853138506,2.86836620748814,0.709336764396714,0,0,0.98667019366864,0,0,0,0,0,1.87457145467037,0.936480230490962,0,0.149448680551801,0,0.323745888736263,0,0.204154171254893,0.245668634623536,0.206651562351531,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0.125118519871964,0,0,1.22595118319608,1.50238058906597,0.680593098960126,3.04962380671065,1.2813443329114,2.33125091275518,6.00182192168805,1.23663035086127,1.03056216018252,2.04728541964749,5.73839529620305,0.584622030967192,3.78650661366172,1.10459878370759,0.969876340912871,2.4850671476163,0.403008392910561,1.18692414617341,0,0.545492241181669,0,0,0,0,0.207322110030741,0,0,10.9514672630871,0,0,0.464367928031979,1.44375896333917,0.354920400119532,0.505754070234305,0,0.441175890929576,0.653638332277218,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0,0,2.6064664424826,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,1.16426079513703,0.581267877027924,0.383382679165211,0,0.44024217006613,1.03664057770386,0.720599767084807,0,0.126995788584338,1.14596527667483,0,0,0.719792448923265,1.20137223137567,0,0.672786506072164,0,1.24675085895615,5.04159691455333,0,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0,0.285955987316295,0.542621605391443,0,1.62868092146868,0,0,0.301439377059586,0,0.799783929456456,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0.831883446123229,0.892144943985809,1.10391690523754,0.35142424497814,0.601892199455438,0,0,2.65690239414175,0.368738337083406,1.56390506042549,0.979005787313703,1.02943027143257,0,0,0,3.03127571446259,3.32870879020994,1.5119514666484,2.97729369382532,2.91577749247319,3.64858122762996,1.92208723883551,4.60536524160033,2.73451665944133,4.45254199334973,2.7757744884478,2.84098760501003,1.47828880824856,1.55776328755086,2.78904908303902,0.241718899183244,0.601519410909855,0.0920809889358963,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0,1.54227252690289,0,0,0,0,0,0,0,1.28225062558195,0.984043937099117,3.25378394664303,1.44257416306811,0,0,0,0,0,0.773365746336976,0.462145851343933,0.15350367472613,0.413509717453592,0.107420244868274,0.145016693914229,0.340906509664404,0.623224249527161,0.165284915360978,0,0,0,0,6.61105928344344,1.3940745403212,0,1.06461206063404,0,0,0,0,0,0.762520775695299,0.511795582622668,0.855877976067841,0,0,0.359744915166629,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0.48763373908959,5.60541026151954,7.39551027297288,0.136499911407986,0.565621727814851,0,1.10273068709225,0.66343897524122,1.75380354101505,0.578775534266688,3.9353685122798,0.405820753925408,0.92947049429925,0.281695602532241,0.286822704408103,1.8667317792493,0.35667105148125,0,1.89996871767898,3.29294892959902,0.379473173765715,1.04980416073495,0.0962221127255121,0,0,1.60044461320525,0,1.68471475667626,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,2.93016358543788,0,0,0,9.5497793895076,4.15750553165694,4.91457123358771,0,0,0,0,0.63337622438398,1.59398390600856,0.552567831062295,0,2.0453736500431,0,14.618860620105,0,0,0,0.887790650732402,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0.227586896570999,0,0.472775363535873,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0,0.10893846351899,0.975966209950223,1.15425387755696,0.569710279235006,0.23056390438806,0,0.108647371922008,20.4160742228428,9.70934490059741,30.9160170090808,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.265372693510018,0.611030144933625,0,0,0,0.269604531922708,1.60515529459758,0.702793337176017,0,0,0,0.789168805698781,0,0,1.0741718536843,0,0.207376382794494,0,0,0,0,0,0,0,0.685946781900644,0,0.873633341210151,0,0,0,0,0.581934098930517,0.0882561266915003,3.16373037092745,0,0,0.189932387867636,0,0,0.213452994739353,0.39961921916426,0,0,0.5147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| |||
|short_description=p1@X77690 | |||
}} |
Revision as of 15:30, 21 January 2014
Short description: | p1@X77690 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_X77690_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 396bp_to_X77690_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.74e-18 | 12 |
fibroblast | 1.80e-14 | 76 |
fat cell | 1.20e-09 | 15 |
extraembryonic cell | 1.29e-09 | 19 |
skin fibroblast | 3.20e-07 | 23 |
chorionic membrane mesenchymal stem cell | 7.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.27e-14 | 14 |
membranous layer | 3.27e-14 | 14 |
organ component layer | 2.30e-13 | 66 |
chorion | 1.46e-12 | 7 |
extraembryonic structure | 3.27e-10 | 24 |
adipose tissue | 6.04e-10 | 14 |
omentum | 6.34e-10 | 6 |
peritoneum | 6.34e-10 | 6 |
abdominal cavity | 6.34e-10 | 6 |
visceral peritoneum | 6.34e-10 | 6 |
cavity lining | 1.35e-09 | 12 |
serous membrane | 1.35e-09 | 12 |
integument | 7.67e-09 | 46 |
integumental system | 7.67e-09 | 46 |
placenta | 2.25e-07 | 4 |
allantois | 2.25e-07 | 4 |
egg chorion | 7.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.55e-08 | 5 |
myotonic disease | 4.55e-08 | 5 |
muscle tissue disease | 4.55e-08 | 5 |
myopathy | 4.55e-08 | 5 |
muscular disease | 4.55e-08 | 5 |
myotonic dystrophy | 4.55e-08 | 5 |