FFCP PHASE1:Hg19::chr3:120118781..120118794,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=11167 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3972 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=141bp_to_ENST00000488318_5end | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_13_at_FSTL1_5end | |||
|id=chr3:120118781..120118794,- | |||
|ontology_enrichment_celltype=CL:0000055!8.02e-22!180;CL:0000057!3.41e-16!75;CL:0002620!1.47e-09!23;CL:0000499!1.23e-08!27;CL:0000680!5.26e-08!57;CL:0000056!5.26e-08!57;CL:0000355!5.26e-08!57;CL:0000192!5.83e-08!42;CL:0000514!5.83e-08!42;CL:0000393!6.30e-08!60;CL:0000211!6.30e-08!60;CL:0000187!6.91e-08!54;CL:0002334!1.92e-07!12;CL:0000359!3.58e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.93e-15;23!CL:0002334;5.58e-15;12!CL:0000153;1.05e-10;9!CL:0000447;1.05e-10;9!CL:0000499;1.28e-09;28!CL:0000138;2.52e-08;6!CL:0002320;6.84e-08;188!CL:0000057;1.25e-07;73!CL:0000327;1.41e-07;15!CL:0000135;1.92e-07;3!CL:0002579;1.92e-07;3!CL:0000388;1.92e-07;3!CL:0002615;2.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.74e-23,76;CL:0002620,3.68e-15,23;CL:0002334,5.65e-15,12;CL:0000153,1.31e-10,9;CL:0000447,1.31e-10,9;CL:0002320,9.18e-10,361;CL:0000134,1.00e-09,354;CL:0000499,1.31e-09,28;CL:0000048,1.58e-09,427;CL:0000723,3.88e-09,433;CL:0000034,1.23e-08,441;CL:0000058,3.34e-08,6;CL:0000138,3.34e-08,6;CL:0000135,1.39e-07,3;CL:0000388,1.39e-07,3;CL:0000327,1.61e-07,15;CL:0000219,1.86e-07,386;CL:0002615,2.22e-07,3;CL:0002579,2.52e-07,3;CL:0002580,5.08e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.26e-09;5!DOID:450;1.26e-09;5!DOID:66;1.26e-09;5!DOID:423;1.26e-09;5!DOID:0080000;1.26e-09;5!DOID:11722;1.26e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.44e-09,5;DOID:450,1.44e-09,5;DOID:66,1.44e-09,5;DOID:423,1.44e-09,5;DOID:0080000,1.44e-09,5;DOID:11722,1.44e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.40e-09!83;UBERON:0002329!1.40e-09!83;UBERON:0003077!1.40e-09!83;UBERON:0003059!1.40e-09!83;UBERON:0007282!1.40e-09!83;UBERON:0009618!1.40e-09!83;UBERON:0007285!1.40e-09!83;UBERON:0002199!1.44e-08!45;UBERON:0002416!1.44e-08!45;UBERON:0004290!2.70e-08!70;UBERON:0000486!9.44e-08!82;UBERON:0001134!1.95e-07!61;UBERON:0002036!1.95e-07!61;UBERON:0003082!1.95e-07!61;UBERON:0002097!3.02e-07!40;UBERON:0002385!3.52e-07!63;UBERON:0001015!3.52e-07!63;UBERON:0000383!3.52e-07!63;UBERON:0003102!7.46e-07!95;UBERON:0004923!9.45e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.77e-15;9!UBERON:0000042;4.77e-15;9!UBERON:0003688;4.29e-13;6!UBERON:0002358;4.29e-13;6!UBERON:0003684;4.29e-13;6!UBERON:0001178;4.29e-13;6!UBERON:0002199;1.32e-10;46!UBERON:0002416;1.32e-10;46!UBERON:0002097;9.05e-10;41!UBERON:0003102;1.95e-08;50!UBERON:0007846;1.92e-07;3!UBERON:0000043;1.92e-07;3!UBERON:0007845;1.92e-07;3!UBERON:0002384;2.49e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.44e-14,46;UBERON:0002416,1.44e-14,46;UBERON:0003688,4.76e-13,6;UBERON:0002358,4.76e-13,6;UBERON:0003684,4.76e-13,6;UBERON:0001178,4.76e-13,6;UBERON:0002097,2.29e-12,41;UBERON:0004457,7.93e-11,12;UBERON:0000042,7.93e-11,12;UBERON:0002384,1.27e-09,371;UBERON:0003102,7.66e-08,99;UBERON:0007846,1.39e-07,3;UBERON:0000043,1.39e-07,3;UBERON:0007845,1.39e-07,3 | |||
|phase1_expression=0.54503513781167,10.2768251467672,1.55049844505568,5.00366491765652,4.91657203870017,3.48935409640147,0,0.631719873426831,1.04474251279935,0,0,0,0.527533956456907,0.37129905888014,1.65698687863958,1.34465029290355,0.602694528023977,0.730310090387373,1.95173119516203,0,0.408001382488506,0,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,1.00267582127178,3.33146993609895,1.5905718941022,1.45990461090791,0.378139268656271,1.33037638477538,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.550236083880135,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0,0,0,0,2.48485975847659,1.51956613997496,0.397227542439656,3.72887606973458,0.709336764396714,0,0,0.74000264525148,0,0.67355336034844,0.653847612453835,0.151357427644931,1.15235184896,0,0,0,0.448346041655403,0.469737994575059,0.323745888736263,0.421352420106746,0.204154171254893,0,0.103325781175765,0,2.22540236350701,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,2.45190236639216,1.35214253015937,0.567160915800105,3.58779271377724,1.2813443329114,1.27159140695737,1.50045548042201,1.33968288009971,1.03056216018252,2.23340227597908,1.18143432568886,1.75386609290158,1.7670364197088,2.02509777013059,1.13152239773168,4.26011511019937,1.61203357164224,1.01736355386293,0.386521706326594,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0,3.12899064659632,1.92972281457866,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0.201057944823262,0,0,1.03993478527958,1.44331342025273,0.115930404975077,0.234817388471643,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.2933531432838,0.517086863031111,3.57656445851882,0,0.797814349754612,0,0.257207374262142,0,0,1.14382394926518,0.542621605391443,0,0.325736184293735,1.06617584622764,1.58390374586686,0.301439377059586,0,1.59956785891291,0,0,0,1.19812427745791,2.29723871668228,0,0,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,1.66376689224646,2.85486382075459,1.26161932027148,0.702848489956279,0.601892199455438,15.9185252839189,0,0,0.737476674166813,0.781952530212746,0,0,0,0,0,0,1.66435439510497,0,1.73675465473144,1.68808170616869,4.77122160536225,3.07533958213682,2.04682899626681,3.53878626515936,0,1.85051632563187,1.24293207719189,0.246381468041427,1.03850885836724,1.16210378459959,0,0.200506470303285,0,0.459257792658427,0.728364672026868,0.655622074797121,0,0.15403067420883,0,0,0.73886140225013,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0,0.574265537996172,0,0,0.096670718292122,0.616194468458578,0.767518373630648,0.275673144969061,0.751941714077915,1.45016693914229,0.255679882248303,0,0,0.384380134730212,0.127612712494584,0,0,1.88887408098384,0.6970372701606,0,0,0.869932992075073,0.37064843820784,1.71749864090389,0.372158369359667,0.949138274156178,0.762520775695299,0.255897791311334,0.42793898803392,0,0.78494864019923,0.539617372749944,0.274537029736055,0.589062011728432,0,0,0.842516912477962,0,1.94970791705028,1.05650146756755,0.9554993798559,1.1312434556297,0,0.551365343546124,0.66343897524122,3.06915619677634,0.578775534266688,0,0,0.92947049429925,0.563391205064483,0.573645408816206,0.589494246078727,0.35667105148125,0,3.58882980006029,5.92730807327823,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.47748896947538,0.593929361665277,1.84296421259539,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,1.86623752597084,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.569710279235006,0,0,0.760531603454056,2.55200927785536,0.549585560411174,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,1.21491816834592,0,0,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0.400794101257669,0.213452994739353,0.39961921916426,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0,0,0.599037001496973,0.858452096273142,0.223171457441873,0.335917362433631,1.44119953416961,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,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| |||
|short_description=p13@FSTL1 | |||
}} |
Revision as of 20:51, 21 January 2014
Short description: | p13@FSTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_13_at_FSTL1_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 141bp_to_ENST00000488318_5end |
EntrezGene: | FSTL1 |
HGNC: | 3972 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.74e-23 | 76 |
skin fibroblast | 3.68e-15 | 23 |
preadipocyte | 5.65e-15 | 12 |
GAG secreting cell | 1.31e-10 | 9 |
carbohydrate secreting cell | 1.31e-10 | 9 |
connective tissue cell | 9.18e-10 | 361 |
mesenchymal cell | 1.00e-09 | 354 |
stromal cell | 1.31e-09 | 28 |
multi fate stem cell | 1.58e-09 | 427 |
somatic stem cell | 3.88e-09 | 433 |
stem cell | 1.23e-08 | 441 |
chondroblast | 3.34e-08 | 6 |
chondrocyte | 3.34e-08 | 6 |
fibrocyte | 1.39e-07 | 3 |
tendon cell | 1.39e-07 | 3 |
extracellular matrix secreting cell | 1.61e-07 | 15 |
motile cell | 1.86e-07 | 386 |
adipocyte of omentum tissue | 2.22e-07 | 3 |
omentum preadipocyte | 2.52e-07 | 3 |
preadipocyte of the breast | 5.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 1.44e-14 | 46 |
integumental system | 1.44e-14 | 46 |
omentum | 4.76e-13 | 6 |
peritoneum | 4.76e-13 | 6 |
abdominal cavity | 4.76e-13 | 6 |
visceral peritoneum | 4.76e-13 | 6 |
skin of body | 2.29e-12 | 41 |
cavity lining | 7.93e-11 | 12 |
serous membrane | 7.93e-11 | 12 |
connective tissue | 1.27e-09 | 371 |
surface structure | 7.66e-08 | 99 |
dense regular connective tissue | 1.39e-07 | 3 |
tendon | 1.39e-07 | 3 |
regular connective tissue | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.44e-09 | 5 |
myotonic disease | 1.44e-09 | 5 |
muscle tissue disease | 1.44e-09 | 5 |
myopathy | 1.44e-09 | 5 |
muscular disease | 1.44e-09 | 5 |
myotonic dystrophy | 1.44e-09 | 5 |