FFCP PHASE1:Hg19::chr4:16085340..16085358,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8842 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9454 | |||
|TSSclassifier=strong | |||
|UniProt=O43490 | |||
|association_with_transcript=0bp_to_ENST00000508167_5end | |||
|description=CAGE_peak_6_at_PROM1_5end | |||
|id=chr4:16085340..16085358,- | |||
|ontology_enrichment_celltype=CL:0000047!6.53e-15!8;CL:0002319!2.60e-12!25;CL:0000540!1.25e-11!6;CL:0000031!1.25e-11!6;CL:0000404!1.25e-11!6;CL:0002322!1.55e-09!5;CL:0000039!5.03e-07!7;CL:0000586!5.03e-07!7;CL:0000133!5.16e-07!59;CL:0002605!8.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.55e-16;7!CL:0000586;6.55e-16;7!CL:0002319;3.46e-14;25!CL:0000540;3.71e-10;6!CL:0000404;3.71e-10;6!CL:0002605;5.72e-10;3!CL:0000037;4.20e-08;1!CL:0001024;4.20e-08;1!CL:0002032;1.00e-07;1!CL:0000557;1.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.10e-16,7;CL:0000586,7.10e-16,7;CL:0002319,2.59e-14,25;CL:0000047,4.00e-13,8;CL:0000540,2.75e-10,6;CL:0000031,2.75e-10,6;CL:0000404,2.75e-10,6;CL:0002605,5.74e-10,3;CL:0000133,6.17e-09,59;CL:0001024,3.80e-08,1;CL:0000221,4.51e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.56e-11;10!UBERON:0005564;3.56e-11;10!CL:0000031;3.71e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.43e-10;22!DOID:2994;1.43e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.34e-10,22;DOID:2994,1.34e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.32e-23!82;UBERON:0005743!3.18e-23!86;UBERON:0000073!2.42e-21!94;UBERON:0001016!2.42e-21!94;UBERON:0000955!1.47e-13!69;UBERON:0006238!1.47e-13!69;UBERON:0001049!9.77e-13!57;UBERON:0005068!9.77e-13!57;UBERON:0006241!9.77e-13!57;UBERON:0007135!9.77e-13!57;UBERON:0002616!5.03e-11!59;UBERON:0003075!7.38e-11!86;UBERON:0007284!7.38e-11!86;UBERON:0001893!8.16e-11!34;UBERON:0002780!1.54e-10!41;UBERON:0001890!1.54e-10!41;UBERON:0006240!1.54e-10!41;UBERON:0002020!1.57e-10!34;UBERON:0003528!1.57e-10!34;UBERON:0003080!3.57e-10!42;UBERON:0002346!5.10e-10!90;UBERON:0002791!6.89e-10!33;UBERON:0004121!2.39e-09!169;UBERON:0000956!2.45e-09!25;UBERON:0000203!2.45e-09!25;UBERON:0007023!3.16e-09!115;UBERON:0001869!6.66e-09!32;UBERON:0000924!7.11e-09!173;UBERON:0006601!7.11e-09!173;UBERON:0003056!7.77e-09!61;UBERON:0000033!4.23e-07!123;UBERON:0000153!5.26e-07!129;UBERON:0007811!5.26e-07!129;UBERON:0000160!6.74e-07!27;UBERON:0005409!9.80e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.12e-14;8!UBERON:0003135;3.62e-10;11!UBERON:0000922;8.37e-09;49!UBERON:0001052;1.56e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.56e-14,8;UBERON:0003135,3.81e-10,11;UBERON:0001052,2.06e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,2.86235987131057,0.547497700291537,2.76193807108566,0,0,0,0,0,0,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.795178609928912,0.580969714347592,0.829288440122964,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.983907508344908,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,1.54657762555539,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0.451199612907412,1.15523005656622,0,0,0.633309773357254,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1490322207942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.20453736500431,0,0,0.359473404589307,0,0,0.197286811273867,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,1.13082457147153,0,0.995261931078505,0.265372693510018,1.22206028986725,0,0,0,0.539209063845416,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.315132729228895,0.164831716762333,0.202210631562555,0,0,0,0.272406812223151,0.803765742325096,0.825236619583403,1.66176135211674,0,0,0.303747783290123,0,0.86686278029118,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.18628920882415,1.798532254171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18977608124458,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,1.76450187355203,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.337687923091973,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0.532214220975833,0,0,0.203909198930495,0.197318320688547,0,0,0.078493092850514,0,0,3.65263488203798,0,0,0.142953088353313,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0.731507549893617,0,0,0,0.485710993059139,0.467878926924211,0,0,0,1.31928620094515,0.603851374266694,0.771741581079447,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0.430018749454354,0,0.135982980381829,0.872701380680755,0,0,0,0,0.378499274505237,1.63898357945543,0,5.09944148709909,2.40495664739004,6.06506336929976,6.26768848230938,0,0,0,0.20686599172379,0,0.476128862927481,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0.358611026963382,0.332660356546013,0,0,0,1.16772762738563,0,0,0.406896178315738,0,0,0 | |||
|short_description=p6@PROM1 | |||
}} |
Revision as of 00:20, 22 January 2014
Short description: | p6@PROM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PROM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508167_5end |
EntrezGene: | PROM1 |
HGNC: | 9454 |
UniProt: | O43490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.10e-16 | 7 |
germ cell | 7.10e-16 | 7 |
neural cell | 2.59e-14 | 25 |
neuronal stem cell | 4.00e-13 | 8 |
neuron | 2.75e-10 | 6 |
neuroblast | 2.75e-10 | 6 |
electrically signaling cell | 2.75e-10 | 6 |
astrocyte of the cerebral cortex | 5.74e-10 | 3 |
neurectodermal cell | 6.17e-09 | 59 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.80e-08 | 1 |
ectodermal cell | 4.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 6.56e-14 | 8 |
male reproductive organ | 3.81e-10 | 11 |
rectum | 2.06e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.34e-10 | 22 |
germ cell cancer | 1.34e-10 | 22 |