FFCP PHASE1:Hg19::chr4:66460864..66460869,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1943 | |||
|description=CAGE_peak_at_chr4:66460864..66460869,- | |||
|id=chr4:66460864..66460869,- | |||
|ontology_enrichment_celltype=CL:0000174!4.34e-07!3;CL:0000062!9.76e-07!11;CL:0000375!9.76e-07!11;CL:0000335!9.76e-07!11 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1115!9.68e-10!20 | |||
|ontology_enrichment_disease_v019=DOID:3371;3.16e-18;1!DOID:4549;3.16e-18;1!DOID:5861;3.16e-18;1!DOID:6496;3.16e-18;1!DOID:3369;4.83e-18;1!DOID:1115;4.09e-08;20!DOID:1192;7.08e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.66e-18,1;DOID:4549,2.66e-18,1;DOID:5861,2.66e-18,1;DOID:6496,2.66e-18,1;DOID:3369,4.44e-18,1;DOID:1115,4.15e-08,20;DOID:1192,6.88e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.33e-22!90;UBERON:0003075!1.83e-22!86;UBERON:0007284!1.83e-22!86;UBERON:0002020!2.85e-21!34;UBERON:0003528!2.85e-21!34;UBERON:0001869!1.01e-20!32;UBERON:0002791!6.03e-20!33;UBERON:0001893!3.26e-19!34;UBERON:0001049!9.45e-19!57;UBERON:0005068!9.45e-19!57;UBERON:0006241!9.45e-19!57;UBERON:0007135!9.45e-19!57;UBERON:0002619!6.27e-18!22;UBERON:0001017!9.53e-18!82;UBERON:0000956!1.14e-17!25;UBERON:0000203!1.14e-17!25;UBERON:0000073!1.50e-17!94;UBERON:0001016!1.50e-17!94;UBERON:0001950!3.37e-17!20;UBERON:0002780!1.14e-16!41;UBERON:0001890!1.14e-16!41;UBERON:0006240!1.14e-16!41;UBERON:0005743!1.58e-16!86;UBERON:0003080!3.79e-16!42;UBERON:0000955!5.68e-15!69;UBERON:0006238!5.68e-15!69;UBERON:0002616!9.54e-15!59;UBERON:0003056!2.91e-14!61;UBERON:0000924!3.10e-13!173;UBERON:0006601!3.10e-13!173;UBERON:0004121!6.87e-13!169;UBERON:0000033!1.75e-10!123;UBERON:0000153!1.30e-09!129;UBERON:0007811!1.30e-09!129;UBERON:0002369!2.33e-07!3;UBERON:0001235!2.33e-07!3;UBERON:0006858!2.33e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.03e-17;1!UBERON:0001950;1.04e-07;20!UBERON:0002619;4.39e-07;22!UBERON:0002369;6.14e-07;3!UBERON:0002418;6.14e-07;3!UBERON:0001235;6.14e-07;3!UBERON:0006858;6.14e-07;3!UBERON:0004755;6.14e-07;3!UBERON:0002114;7.08e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.03e-17,1;UBERON:0001950,1.04e-07,20;UBERON:0002619,4.40e-07,22;UBERON:0002418,5.80e-07,3;UBERON:0004755,5.80e-07,3;UBERON:0002369,6.50e-07,3;UBERON:0001235,6.50e-07,3;UBERON:0006858,6.50e-07,3;UBERON:0002114,7.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.379891534993739,0.264818361626438,0,1.06400514659507,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,3.15537356548735,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,1.03423011972439,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53036380815245,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,3.79501344773451,0,0,0,0.443175571691151,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.680117776536817,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0.736423801007363,0,0,0,0.107824811396682,0,0,0,0,0.743614585554013,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0.192687675289379,0,0.319267718114302,0.205116364240755,1.00828678488687,0,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0,0,0.413373593002368,0.19024743058172,3.28184885410932,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0.679708458751268,0,0,0,0,0,0,0,0,0,0.157771562193185,0,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:66460864..66460869,- | |||
}} |
Revision as of 01:14, 22 January 2014
Short description: | p@chr4:66460864..66460869, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr4:66460864..66460869, - |
Coexpression cluster: | C1943_extraskeletal_temporal_occipital_adrenal_parietal_duodenum_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.03e-17 | 1 |
neocortex | 1.04e-07 | 20 |
regional part of cerebral cortex | 4.40e-07 | 22 |
cartilage tissue | 5.80e-07 | 3 |
skeletal tissue | 5.80e-07 | 3 |
adrenal gland | 6.50e-07 | 3 |
adrenal cortex | 6.50e-07 | 3 |
adrenal/interrenal gland | 6.50e-07 | 3 |
duodenum | 7.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.66e-18 | 1 |
extraosseous chondrosarcoma | 2.66e-18 | 1 |
myxoid chondrosarcoma | 2.66e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 2.66e-18 | 1 |
peripheral primitive neuroectodermal tumor | 4.44e-18 | 1 |
sarcoma | 4.15e-08 | 20 |
peripheral nervous system neoplasm | 6.88e-07 | 3 |