FFCP PHASE1:Hg19::chr5:133482533..133482554,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1525 | |||
|description=CAGE_peak_at_chr5:133482533..133482554,+ | |||
|id=chr5:133482533..133482554,+ | |||
|ontology_enrichment_celltype=CL:0000084!9.66e-12!25;CL:0000827!9.66e-12!25;CL:0000791!1.18e-11!18;CL:0000789!1.18e-11!18;CL:0002420!1.18e-11!18;CL:0002419!1.18e-11!18;CL:0000790!1.18e-11!18;CL:0000838!3.81e-11!52;CL:0000542!8.78e-11!53;CL:0000051!8.78e-11!53;CL:0000625!5.95e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.95e-21;25!CL:0000791;4.12e-18;18!CL:0000789;4.12e-18;18!CL:0002419;4.12e-18;18!CL:0000625;1.90e-15;11!CL:0000542;9.77e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.86e-21,25;CL:0000827,2.86e-21,25;CL:0000791,3.48e-18,18;CL:0000789,3.48e-18,18;CL:0002420,3.48e-18,18;CL:0002419,3.48e-18,18;CL:0000790,3.48e-18,18;CL:0000625,1.68e-15,11;CL:0000838,3.18e-14,52;CL:0000542,6.43e-14,53;CL:0000051,6.43e-14,53;CL:0000738,2.59e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;4.12e-18;18!CL:0000051;9.77e-09;53!UBERON:0000358;1.81e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.04e-08!15;UBERON:0000179!2.04e-08!15;UBERON:0000463!2.04e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.27e-15;2!UBERON:0005058;2.27e-15;2!UBERON:0009113;2.27e-15;2!UBERON:0000178;2.31e-11;15!UBERON:0000179;2.31e-11;15!UBERON:0000463;2.31e-11;15!UBERON:0002390;1.16e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.16e-11,15;UBERON:0000179,2.16e-11,15;UBERON:0000463,2.16e-11,15;UBERON:0002370,3.97e-08,4;UBERON:0005058,3.97e-08,4;UBERON:0009113,3.97e-08,4;UBERON:0003295,3.97e-08,4;UBERON:0005562,3.97e-08,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,1.22261449196722,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0.983548850569165,6.28817220398664,2.67281948699362,0,0.651844533267181,0.946895611469467,0,0.111410456885174,0.294605907474837,0.443067789167242,0,0,0.130059347559878,1.15106533222573,0.829050053357545,1.44901542867526,1.4828656316206,1.07016331235885,6.27213142829861,0,0,0,1.01207876807801,0.637130828648193,0,0,0.903450714466637,0.895906278080929,0,1.4206635122641,1.64225599384209,1.00803371612366,3.20928234940209,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0.560677600142307,0,0,0,0,0,0,0,0,0.624320153660641,0,0.448346041655403,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50487269004906,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,1.50939302401662,0.77005821767849,0,0,0,0,0,0,2.99161459204025,0,0,0.500170521059677,0,0,0.535286966391485,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,0.862856803274467,1.70764092485511,0,0,0.30239029332968,0,0,0,0,0,0,0,1.07946785661859,0.355123450626254,0.246381468041427,0.519254429183621,0.929683027679674,0.241718899183244,0.200506470303285,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,2.27858874869665,0.714695326373367,0.822724546172388,0,1.08006287447623,1.58625035258854,0,0,0.245040215981032,0,0,1.77854608371035,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,6.13159789174419,0,0,0,0,0.167821586975843,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0.485560759068186,0,1.20990716048664,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0.288109595976299,0,0,0,0,0.203996435272644,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.164831716762333,0.13480708770837,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0.138348634936231,0,0,0,0.235265819698172,0.468334905806882,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.218419276384028,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0.126166424835079,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,0.151557396436479,0,0,0.103432995861895,0,0,5.68382406556854,2.48298857183432,0.112131862580613,0,0,0,0,0.134704106029175,0,0,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0.402547587182052,0.641136984606466 | |||
|short_description=p@chr5:133482533..133482554,+ | |||
}} |
Revision as of 07:26, 22 January 2014
Short description: | p@chr5:133482533..133482554, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:133482533..133482554, + |
Coexpression cluster: | C1525_Hodgkin_chronic_CD4_thymus_Whole_blood_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.86e-21 | 25 |
pro-T cell | 2.86e-21 | 25 |
mature alpha-beta T cell | 3.48e-18 | 18 |
alpha-beta T cell | 3.48e-18 | 18 |
immature T cell | 3.48e-18 | 18 |
mature T cell | 3.48e-18 | 18 |
immature alpha-beta T cell | 3.48e-18 | 18 |
CD8-positive, alpha-beta T cell | 1.68e-15 | 11 |
lymphoid lineage restricted progenitor cell | 3.18e-14 | 52 |
lymphocyte | 6.43e-14 | 53 |
common lymphoid progenitor | 6.43e-14 | 53 |
leukocyte | 2.59e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 2.16e-11 | 15 |
haemolymphatic fluid | 2.16e-11 | 15 |
organism substance | 2.16e-11 | 15 |
thymus | 3.97e-08 | 4 |
hemolymphoid system gland | 3.97e-08 | 4 |
thymic region | 3.97e-08 | 4 |
pharyngeal gland | 3.97e-08 | 4 |
thymus primordium | 3.97e-08 | 4 |