FFCP PHASE1:Hg19::chr5:140613918..140613941,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54660 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=14548 | |||
|TSSclassifier=strong | |||
|UniProt=Q96TA0 | |||
|association_with_transcript=0bp_to_ENST00000526308,NR_001281,uc003ljc.1_5end | |||
|description=CAGE_peak_1_at_PCDHB18_5end | |||
|id=chr5:140613918..140613941,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.04e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.43e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.60e-20;3!UBERON:0004140;1.07e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.10e-27!115;UBERON:0001049!3.84e-19!57;UBERON:0005068!3.84e-19!57;UBERON:0006241!3.84e-19!57;UBERON:0007135!3.84e-19!57;UBERON:0001017!1.33e-18!82;UBERON:0005743!3.51e-18!86;UBERON:0000073!1.25e-16!94;UBERON:0001016!1.25e-16!94;UBERON:0002616!1.92e-15!59;UBERON:0002780!1.37e-13!41;UBERON:0001890!1.37e-13!41;UBERON:0006240!1.37e-13!41;UBERON:0000955!2.48e-13!69;UBERON:0006238!2.48e-13!69;UBERON:0003080!4.56e-13!42;UBERON:0002346!5.11e-13!90;UBERON:0003075!1.92e-12!86;UBERON:0007284!1.92e-12!86;UBERON:0001893!1.64e-10!34;UBERON:0002791!4.82e-10!33;UBERON:0000924!6.21e-10!173;UBERON:0006601!6.21e-10!173;UBERON:0002020!9.22e-10!34;UBERON:0003528!9.22e-10!34;UBERON:0004121!2.04e-09!169;UBERON:0001869!2.32e-09!32;UBERON:0000468!2.79e-09!659;UBERON:0001950!2.17e-08!20;UBERON:0002619!2.65e-08!22;UBERON:0003056!4.91e-08!61;UBERON:0000956!7.01e-08!25;UBERON:0000203!7.01e-08!25;UBERON:0003076!1.72e-07!15;UBERON:0003057!1.72e-07!15;UBERON:0000153!2.99e-07!129;UBERON:0007811!2.99e-07!129;UBERON:0000922!3.53e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.56e-20;49!UBERON:0003296;3.61e-15;4!UBERON:0010133;3.61e-15;4!UBERON:0000007;4.60e-14;2!UBERON:0002108;1.37e-12;4!UBERON:0002037;2.34e-10;6!UBERON:0002114;4.58e-10;2!UBERON:0001894;6.92e-09;7!UBERON:0005795;4.65e-08;1!UBERON:0006834;1.07e-07;1!UBERON:0001016;1.30e-07;83!UBERON:0002680;4.69e-07;9!UBERON:0001895;4.69e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.62e-15,4;UBERON:0010133,3.62e-15,4;UBERON:0000007,6.62e-14,2;UBERON:0002108,1.51e-12,4;UBERON:0001017,1.56e-12,81;UBERON:0001016,4.84e-11,89;UBERON:0002037,2.75e-10,6;UBERON:0006215,2.75e-10,6;UBERON:0002114,4.80e-10,2;UBERON:0001049,1.12e-09,56;UBERON:0005068,1.12e-09,56;UBERON:0006241,1.12e-09,56;UBERON:0007135,1.12e-09,56;UBERON:0001894,6.93e-09,7;UBERON:0006222,6.93e-09,7;UBERON:0011216,1.84e-08,223;UBERON:0000073,2.30e-08,53;UBERON:0002616,2.30e-08,53;UBERON:0006834,7.97e-08,1;UBERON:0000955,1.28e-07,68;UBERON:0006238,1.28e-07,68;UBERON:0002680,5.21e-07,9;UBERON:0001895,5.21e-07,9;UBERON:0010092,5.21e-07,9;UBERON:0003076,5.25e-07,15;UBERON:0003057,5.25e-07,15 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0,0.552299391853796,0.323292113637624,0,0,0,0,0,0,0.731842236777572,1.06023814657188,0.348581828608555,1.0366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,1.27047312111232,1.30139853857622,0.773288812777695,3.51784157202132,0,0,0,0,0.49076596687656,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.495056999523528,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.801288320820636,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,3.22795244566427,0,0.422250816255987,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,1.52581736317083,3.53853631779919,1.18219047581419,0,0,0,1.38510465306835,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0.394584402849391,0,1.83643656978294,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,0.633107959558787,0,0.561111741760736,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.273810757783986,0,0,0,0.837847203816763,0,0,0,0,0,1.47803639470798,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0,0.0788057072991982,1.78345599658994,1.5840050477911,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.387848869084652,0,0,0,0,2.35806457649499,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.876336514945499,0,0.443716206147409,0.496771223531068,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.800055529326307,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0.617602894321944,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0.422624246717254,0,0,0,0,0.368211900503681,0,0,0,0,0,0.327628914576042,0,0.637724760305049,0.371807292777007,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0.798169295285756,0.205116364240755,3.52900374710405,0.484100767249525,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,1.65462722368366,0,0.781514011233092,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,2.18789923607288,0,0.496211178389294,0,0,1.60710550763486,0.336283722218824,1.21393120847326,2.27662191351298,0.354809480650555,0,0,0.203909198930495,0.131545547125698,0,0,0.941917114206168,0.157115589916002,0,3.65263488203798,0,0,0.929195074296532,0,0,0,0,0,0,0,1.29068207646083,0,0.0852134047591577,0.423387050190929,0.22910686854405,0.93061915699296,0,0,0.098150233615243,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0.603851374266694,0.0771741581079447,1.31135736302374,0,0.490296643507811,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,5.67255897442491,2.1161073620616,0,0.462175628631418,0,0,0.218531143927391,0.886889507080059,0.101988829741982,0,0,0,0.682008283964155,0.803892390468535,0,0,0,0.952257725854961,0.0645889098360061,0.248298857183432,0.224263725161227,0.636471582781649,0.404234377916439,0.653150243690884,0.684466602170562,0.134704106029175,0.215166616178029,0,0,0.106727345877715,0,0,0,1.58913877437726,2.03448089157869,0,0.402547587182052,0 | |||
|short_description=p1@PCDHB18 | |||
}} |
Revision as of 07:52, 22 January 2014
Short description: | p1@PCDHB18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHB18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526308, NR_001281, uc003ljc.1_5end |
EntrezGene: | PCDHB18 |
HGNC: | 14548 |
UniProt: | Q96TA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.43e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 3.62e-15 | 4 |
neuroendocrine gland | 3.62e-15 | 4 |
pituitary gland | 6.62e-14 | 2 |
small intestine | 1.51e-12 | 4 |
central nervous system | 1.56e-12 | 81 |
nervous system | 4.84e-11 | 89 |
cerebellum | 2.75e-10 | 6 |
rhombic lip | 2.75e-10 | 6 |
duodenum | 4.80e-10 | 2 |
neural tube | 1.12e-09 | 56 |
neural rod | 1.12e-09 | 56 |
future spinal cord | 1.12e-09 | 56 |
neural keel | 1.12e-09 | 56 |
diencephalon | 6.93e-09 | 7 |
future diencephalon | 6.93e-09 | 7 |
organ system subdivision | 1.84e-08 | 223 |
regional part of nervous system | 2.30e-08 | 53 |
regional part of brain | 2.30e-08 | 53 |
uterus or analog | 7.97e-08 | 1 |
brain | 1.28e-07 | 68 |
future brain | 1.28e-07 | 68 |
regional part of metencephalon | 5.21e-07 | 9 |
metencephalon | 5.21e-07 | 9 |
future metencephalon | 5.21e-07 | 9 |
posterior neural tube | 5.25e-07 | 15 |
chordal neural plate | 5.25e-07 | 15 |