FFCP PHASE1:Hg19::chr6:31887888..31887896,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1248 | |||
|TSSclassifier=weak | |||
|UniProt=F2Z306 | |||
|association_with_transcript=15bp_to_ENST00000484636_5end | |||
|description=CAGE_peak_8_at_C2_5end | |||
|id=chr6:31887888..31887896,+ | |||
|ontology_enrichment_celltype=CL:0000575!5.53e-11!2;CL:1000415!5.81e-11!2;CL:0002537!4.01e-10!5;CL:0002076!7.23e-08!43;CL:0002623!1.39e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.71e-40;5!CL:0000349;3.20e-24;19!CL:0002541;9.46e-18;3!CL:0000134;3.89e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.71e-40,5;CL:0000349,3.20e-24,19;CL:0002541,9.46e-18,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002294!1.25e-11!7;UBERON:0001173!1.25e-11!7;UBERON:0004912!1.25e-11!7;UBERON:0004119!2.03e-11!169;UBERON:0000925!2.03e-11!169;UBERON:0006595!2.03e-11!169;UBERON:0003127!3.51e-11!2;UBERON:0005631!4.53e-09!14;UBERON:0000158!4.53e-09!14;UBERON:0001044!3.60e-08!6;UBERON:0003293!3.60e-08!6;UBERON:0003294!3.60e-08!6;UBERON:0010047!3.60e-08!6;UBERON:0000167!3.60e-08!6;UBERON:0000161!7.29e-08!35;UBERON:0002110!1.39e-07!3;UBERON:0006242!1.39e-07!3;UBERON:0001004!1.73e-07!72;UBERON:0000305!2.43e-07!7;UBERON:0000077!2.70e-07!130;UBERON:0000078!9.85e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.64e-45;10!UBERON:0000158;5.64e-45;10!UBERON:0000305;3.65e-29;7!UBERON:0006562;5.56e-26;2!UBERON:0000478;2.13e-19;24!UBERON:0003124;9.46e-18;3!UBERON:0000920;9.46e-18;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.81e-32,14;UBERON:0000158,1.81e-32,14;UBERON:0000305,3.65e-29,7;UBERON:0004871,1.11e-25,8;UBERON:0000478,2.13e-19,24;UBERON:0000920,9.46e-18,3;UBERON:0003124,2.18e-08,7;UBERON:0004923,1.24e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.593929361665277,4.30024982938925,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,2.23300811812344,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0.496211178389294,0,3.44958554626907,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.202056159043763,0.358611026963382,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p8@C2 | |||
}} |
Revision as of 11:09, 22 January 2014
Short description: | p8@C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000484636_5end |
EntrezGene: | C2 |
HGNC: | 1248 |
UniProt: | F2Z306 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.71e-40 | 5 |
extraembryonic cell | 3.20e-24 | 19 |
chorionic membrane mesenchymal stem cell | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.81e-32 | 14 |
membranous layer | 1.81e-32 | 14 |
amnion | 3.65e-29 | 7 |
somatic layer of lateral plate mesoderm | 1.11e-25 | 8 |
extraembryonic structure | 2.13e-19 | 24 |
egg chorion | 9.46e-18 | 3 |
chorion | 2.18e-08 | 7 |
organ component layer | 1.24e-07 | 66 |