FFCP PHASE1:Hg19::chr6:111804863..111804876,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5980 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9968 | |||
|TSSclassifier=strong | |||
|UniProt=O60673 | |||
|association_with_transcript=38bp_to_ENST00000358835,ENST00000435970_5end | |||
|description=CAGE_peak_8_at_REV3L_5end | |||
|id=chr6:111804863..111804876,- | |||
|ontology_enrichment_celltype=CL:0000860!1.20e-12!45;CL:0002057!2.46e-11!42;CL:0000738!1.22e-09!140;CL:0000766!3.16e-08!76;CL:0000037!3.42e-08!172;CL:0000566!3.42e-08!172;CL:0000988!1.47e-07!182;CL:0002032!2.42e-07!165;CL:0000837!2.42e-07!165;CL:0002031!2.73e-07!124;CL:0002087!2.79e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-08;33!CL:0002057;2.32e-08;33!CL:0000576;1.18e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.64e-14,136;CL:0000860,4.53e-14,42;CL:0002057,4.53e-14,42;CL:0000766,7.32e-12,72;CL:0000473,3.22e-11,48;CL:0000234,3.22e-11,48;CL:0002031,1.00e-10,120;CL:0002087,3.18e-10,115;CL:0000037,4.73e-10,168;CL:0000988,8.52e-10,177;CL:0000557,5.43e-09,67;CL:0002032,1.18e-08,161;CL:0000837,1.18e-08,161;CL:0002009,1.96e-08,61;CL:0000839,2.49e-08,66;CL:0002194,4.96e-08,59;CL:0000576,4.96e-08,59;CL:0000040,4.96e-08,59;CL:0000559,4.96e-08,59;CL:0002393,6.84e-07,9;CL:0002397,6.84e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.85e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.88e-09,76;UBERON:0001474,5.24e-09,82;UBERON:0004765,6.81e-08,90;UBERON:0002405,7.60e-08,93;UBERON:0001434,3.92e-07,100;UBERON:0002390,8.72e-07,98;UBERON:0003061,8.72e-07,98 | |||
|phase1_expression=0.908391896352783,1.07050261945492,1.55049844505568,0,0.446961094427288,0,0,1.26343974685366,1.04474251279935,0,0,1.09220686065086,0.263766978228454,0.37129905888014,0.662794751455832,0,0,0,0.487932798790507,0,0.408001382488506,0,0.286235987131057,0.273748850145768,0.627713197974014,1.45185470921107,1.39571002064908,1.73163718890094,0.786728553697808,1.53531759238885,1.23852898652861,0,0.30120591877825,0,0.852139206383318,0.426507697462265,1.76160263600908,3.32397245119126,2.4065333696417,4.12320654360118,0,0.32389366601898,0,1.30858414901608,0,0.970336244751265,1.16214518452842,1.23350366406548,0.309706370895104,0,1.5369642391746,0.709446689665756,2.06847408441971,1.29096936716765,2.70852973188684,1.50593871634084,1.09162460023138,0.449446968890169,0.918251677112708,0.320929027076094,1.27867425159808,0.989553900560148,0.997318288108159,0.426224750532694,5.22376629531451,3.40431134814684,3.73693349397345,2.26123798731069,0.521482918420201,1.52032191293582,1.21079900526674,2.57794345191295,2.84816148696796,0.422510572623884,1.70083439972035,1.67726916406701,1.57260083605093,1.65194582125657,0.48217676009124,2.85012743741249,0.59675003159727,1.82664153764634,1.75996244461323,1.09227722252426,1.77901850772711,0,0.800791974072025,1.14950487990897,0,0,1.70763890732835,1.17447437874188,2.29363936875137,0,0,0.263384084775077,1.57367816091066,0.393010762749165,1.02800749499755,0.83593247695339,0.32592226663359,2.36723902867367,0,0.891283655081389,2.06224135232386,0.886135578334485,1.35401931882508,1.0247305578054,0.780356085359269,0.986627427622057,0.829050053357545,1.15921234294021,1.18629250529648,1.60524496853828,0,0.906474741580529,1.14966148080576,1.37450978193052,0.759059076058509,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,1.87208137048455,1.30341963494519,0,0,0.12786256184353,1.0843174571537,0,0.869079113764942,0,0.486634870302636,0.661743720148475,0.665188192387692,0.614843499851882,0.982343066232845,0.364295288292542,0,0,0.174129737299267,0.132957960518865,0.238490624305342,1.14398982156026,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.550236083880135,0.208994966536811,1.8089173141853,1.06729878806013,1.33888245105868,0,0,0.488124115096339,0,0.81014194788176,0.446498641420399,0,0.563057402416611,3.06633274931766,0,0.366403487860815,1.31780417436063,3.87780264148325,0.436094052142534,0.496971951695318,1.01304409331664,2.1185468930115,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0.937285727335186,0.624320153660641,0,0.448346041655403,0.352303495931295,0.485618833104395,0.140450806702248,1.63323337003915,0.491337269247072,2.06651562351531,2.37600571456411,1.48360157567134,0,0.718618141816238,0.336672227908132,0.250237039743928,0.831192346452549,0.438977620880838,0.919463387397059,1.20190447125277,0.453728732640084,0.538168907066586,1.06778694409284,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.930584281657949,1.18143432568886,0.0974370051611986,0.504867548488229,1.38074847963449,0.161646056818812,1.06502877754984,0.302256294682921,0.339121184620975,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,1.92972281457866,2.76269842704961,0.928735856063958,0.721879481669586,0.236613600079688,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.674156540800822,0,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0.245976877086227,0.171567810298526,0.548751427043128,0,0.402115889646523,0.277765335475589,0,1.03993478527958,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0,2.37061319387782,2.57545848628462,0,0,0,0,0.16798212819886,0.425325291727159,0.806026704325635,0,0,1.47798971368783,0.176096868026452,1.03664057770386,1.44119953416961,0.6312121671319,0.444485260045183,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0.112131084345361,0,0.1466765716419,0.387815147273333,7.15312891703765,0,0.531876233169741,0,0,0,0,0.428933980974443,1.08524321078289,0,0,0.355391948742546,0,0.301439377059586,0,0.599837947092342,0,0,0,0.958499421966331,3.44585807502342,2.85273810081437,0.579125226670317,1.02738161275192,1.43248770591916,0.672510863961164,0.985153801009636,1.50939302401662,2.18183161675572,0.254094624222463,0,0,0,0,2.99602809578873,2.99161459204025,0.414415513436035,1.2269149171914,0.500170521059677,0,0.415941723061614,0.892144943985809,1.26161932027148,1.52283839490527,0.601892199455438,0,1.03473071292505,0.664225598535437,0.184369168541703,1.39013783148933,0.195801157462741,0.343143423810856,0.620304078368662,1.07857100409308,1.17400313583789,0,1.66435439510497,0.604780586659361,0.496215615637554,0.920771839728375,0,0.768834895534206,1.53512174720011,0.321707842287215,0,0.308419387605311,0,0.739144404124282,0.519254429183621,0.116210378459959,0.362578348774867,0.802025881213139,0.552485933615378,0.34444334449382,0.910455840033585,1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| |||
|short_description=p8@REV3L | |||
}} |
Revision as of 13:24, 22 January 2014
Short description: | p8@REV3L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_REV3L_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000358835, ENST00000435970_5end |
EntrezGene: | REV3L |
HGNC: | 9968 |
UniProt: | O60673 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.64e-14 | 136 |
classical monocyte | 4.53e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.53e-14 | 42 |
myeloid leukocyte | 7.32e-12 | 72 |
defensive cell | 3.22e-11 | 48 |
phagocyte | 3.22e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 1.00e-10 | 120 |
nongranular leukocyte | 3.18e-10 | 115 |
hematopoietic stem cell | 4.73e-10 | 168 |
hematopoietic cell | 8.52e-10 | 177 |
granulocyte monocyte progenitor cell | 5.43e-09 | 67 |
hematopoietic oligopotent progenitor cell | 1.18e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-08 | 161 |
macrophage dendritic cell progenitor | 1.96e-08 | 61 |
myeloid lineage restricted progenitor cell | 2.49e-08 | 66 |
monopoietic cell | 4.96e-08 | 59 |
monocyte | 4.96e-08 | 59 |
monoblast | 4.96e-08 | 59 |
promonocyte | 4.96e-08 | 59 |
intermediate monocyte | 6.84e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.84e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.88e-09 | 76 |
bone element | 5.24e-09 | 82 |
skeletal element | 6.81e-08 | 90 |
immune system | 7.60e-08 | 93 |
skeletal system | 3.92e-07 | 100 |
hematopoietic system | 8.72e-07 | 98 |
blood island | 8.72e-07 | 98 |