FFCP PHASE1:Hg19::chr7:41740181..41740234,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6066 | |||
|TSSclassifier=strong | |||
|UniProt=P08476 | |||
|association_with_transcript=0bp_to_ENST00000442711,uc003thq.2_5end | |||
|coexpression_cluster_id=C1986 | |||
|description=CAGE_peak_3_at_INHBA_5end | |||
|id=chr7:41740181..41740234,- | |||
|ontology_enrichment_celltype=CL:0000055!5.09e-21!180;CL:0000057!1.49e-14!75;CL:0000680!1.00e-07!57;CL:0000056!1.00e-07!57;CL:0000355!1.00e-07!57;CL:0000187!3.27e-07!54;CL:0000192!3.30e-07!42;CL:0000514!3.30e-07!42;CL:0000359!4.45e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.83e-07;12!CL:0000057;8.25e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.79e-16,76;CL:0000680,1.27e-07,58;CL:0000056,1.27e-07,58;CL:0000355,1.27e-07,58;CL:0002334,3.67e-07,12;CL:0000192,4.40e-07,43;CL:0000514,4.40e-07,43;CL:0000187,4.51e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.99e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.29e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.47e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.81e-13!659;UBERON:0000914!1.91e-10!83;UBERON:0002329!1.91e-10!83;UBERON:0003077!1.91e-10!83;UBERON:0003059!1.91e-10!83;UBERON:0007282!1.91e-10!83;UBERON:0009618!1.91e-10!83;UBERON:0007285!1.91e-10!83;UBERON:0000475!2.80e-10!365;UBERON:0000467!7.50e-10!625;UBERON:0000480!1.22e-09!626;UBERON:0000486!2.28e-08!82;UBERON:0002385!2.32e-08!63;UBERON:0001015!2.32e-08!63;UBERON:0000383!2.32e-08!63;UBERON:0004872!2.90e-08!84;UBERON:0001134!2.97e-08!61;UBERON:0002036!2.97e-08!61;UBERON:0003082!2.97e-08!61;UBERON:0002049!3.21e-08!79;UBERON:0007798!3.21e-08!79;UBERON:0004290!4.76e-08!70;UBERON:0003102!4.79e-08!95;UBERON:0001637!1.65e-07!42;UBERON:0003509!1.65e-07!42;UBERON:0004572!1.65e-07!42;UBERON:0005256!2.79e-07!143;UBERON:0000922!3.74e-07!612;UBERON:0002050!5.87e-07!605;UBERON:0005423!5.87e-07!605;UBERON:0001981!6.61e-07!60;UBERON:0007500!6.61e-07!60;UBERON:0004537!6.61e-07!60;UBERON:0006965!6.61e-07!60;UBERON:0000923!9.17e-07!604;UBERON:0005291!9.17e-07!604;UBERON:0006598!9.17e-07!604;UBERON:0002532!9.17e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.28e-08,83;UBERON:0007524,2.87e-08,73;UBERON:0003102,3.09e-08,99;UBERON:0002329,3.22e-08,71;UBERON:0003059,3.22e-08,71;UBERON:0007282,3.22e-08,71;UBERON:0004290,3.22e-08,71;UBERON:0009618,3.22e-08,71;UBERON:0001134,3.39e-08,62;UBERON:0002036,3.39e-08,62;UBERON:0003082,3.39e-08,62;UBERON:0002385,4.70e-08,64;UBERON:0001015,4.70e-08,64;UBERON:0000383,4.70e-08,64;UBERON:0003077,7.22e-08,72;UBERON:0007285,7.22e-08,72;UBERON:0007503,9.57e-08,78 | |||
|phase1_expression=37.9707812675463,17.9844440068426,45.6692269270947,27.0197905553452,20.5602103436552,16.574431957907,7.59899634504932,3.79031924056099,0.783556884599516,0.982935746006035,0.697801167972428,5.46103430325431,4.74780560811216,2.84662611808107,2.31978163009541,8.0679017574213,4.82155622419182,2.19093027116212,4.39139518911456,2.09305798730539,2.65200898617529,0.626909442956176,2.0036519099174,1.50561867580173,2.38531015230125,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0.6024118375565,0.739508020333575,0,0,0,0,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0,1.39457422143411,3.70051099219643,1.54853185447552,3.74000110018796,1.7931249457037,0.945928919554341,4.82643953031266,5.16387746867061,2.70852973188684,0.752969358170419,0.818718450173537,0.449446968890169,9.79468455586888,4.49300637906531,5.75403413219137,0,0.199463657621632,0,4.06292934080018,12.4824749432051,12.4564449799115,2.51248665256743,2.08593167368081,1.73751075764093,3.63239701580021,5.52416453981347,2.84816148696796,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,2.04580098949649,13.7346877906135,5.0133791063589,6.80778639115871,10.3387173116643,8.75942766544745,1.79616152611729,9.09090529596512,3.77689578480442,1.0478326039817,1.09288586487763,1.11235332835329,0.324547393654683,0.696518949197069,1.06366368415092,0,0,0,0.39752481473341,3.4409383804245,0.694281003215189,0.56530794192401,5.87299210693868,3.02629846134074,2.50793959844173,0.258416759169329,0.35576626268671,4.01664735317604,1.61131726843659,0.760272105718513,0,0.367663080345869,4.86085168729056,0.803697554556718,0.44905874525234,1.0135033243499,0,1.89853131913626,0.366403487860815,0,0,0.436094052142534,27.8304292949378,10.7635934914893,14.1677823470144,23.2337662806539,3.90135220418193,7.28880880184999,4.2699598291882,8.14002909776628,3.11211035399766,1.61652806483626,2.61539044981534,2.8757911252537,8.06646294271999,0.468642863667593,0,0,1.79338416662161,1.52664848236894,1.78060238804945,2.38766371393822,4.08308342509786,3.19369225010597,2.06651562351531,13.0680314301026,20.2758882008417,0.910161361938026,2.87447256726495,2.18836948140286,2.00189631795143,6.37247465613621,15.3642167308293,17.1633165647451,10.065949946742,1.58805056424029,13.0954434052869,10.6778694409284,5.29829752898905,3.60109315301283,1.23663035086127,13.1396675423271,8.93360910391631,20.0843835367107,7.98983442321829,6.56327813034698,7.91629128323774,3.07127507955743,24.4956618836464,5.74286959897549,5.93462073086707,4.05847791642923,4.90943017063502,2.86804595389004,0.121973706129595,0.265059536642971,1.04574548582567,0.414644220061482,1.26160425437814,0,3.12899064659632,5.14592750554308,2.76269842704961,3.71494342425583,2.16563844500876,0,0,0,0,0,0,0,0,0,0,2.80483547606892,2.057870056657,1.47008711385542,0,0,0,0,0.122988438543114,3.94605963686609,2.63400684980701,0,2.21163739305588,3.42577247086559,0.651616610620649,0,2.88662684050547,1.15930404975077,25.7125040376449,2.59859605969933,0,1.52203321787679,0.790204397959275,0,0,0.468008530278475,0,0.93733833986777,8.39910640994298,2.26840155587818,4.03013352162817,2.90633938513962,0.766765358330422,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,5.83081638595876,1.74384027533312,8.43390286940925,24.8201694254933,0,9.298330278116,21.0091112102048,7.28052058379563,1.28603687131071,1.41849132023278,0.799266537048298,13.0109974228914,0,0.823240336780769,2.28015329005615,4.26470338491055,2.37585561880029,2.71295439353627,0,4.69873058555668,0,0,0,45.2890976879091,39.0530581835987,4.27910715122155,2.75084482668401,2.26023954805422,6.80431660311603,0,0,0,0,0.76228387266739,2.60279707715243,0.773288812777695,0.502548796003046,1.91381625495949,0,0,0.828831026872071,2.4538298343828,4.50153468953709,2.98391526069709,43.4659100599387,42.8229573113188,51.4109873010627,30.5739093130981,7.82459859292069,2.27407504055985,1.03473071292505,9.29915837949611,3.31864503375066,1.30325421702124,1.37060810223918,0,0.413536052245775,0,0,0.909382714338778,4.99306318531491,1.5119514666484,36.4718477493602,58.0086259028876,29.1886498210397,28.3187519855099,48.6121886613368,20.4284479852382,1.48418066444991,3.54682295746108,4.79416658345443,6.24166385704949,5.71179872101983,5.34567740915813,0.120859449591622,10.4263364557708,0.828728900423067,1.26295892981067,1.63882051206045,1.96686622439136,0,2.84956747286335,0.784349769176855,0,4.74982330017941,0,0.170093705276516,9.06846847628985,6.16909010761157,1.08378575017541,1.00337954770971,0,0,0.671624264166535,0,0,0,0.656029291399411,1.95227036798582,0.9273691048295,7.14241825583079,4.95056999523528,0.574265537996172,0.650060246036521,1.6068392984416,2.03008508413456,1.54048617114644,1.07452572308291,4.9621166094431,1.50388342815583,0.580066775656914,1.27839941124151,3.47224939022276,1.32227932288782,1.92190067365106,4.59405764980503,0.2023155617111,1.39453664789186,40.6107927411526,0.6970372701606,11.3972424665153,1.06461206063404,0.869932992075073,5.93037501132544,6.72686967687359,7.81532575655301,10.440521015718,5.3376454298671,0,3.85145089230528,0.636406495851874,2.35484592059769,8.09426059124916,4.39259247577688,3.65218447271628,3.63928466831969,4.75530963519025,2.52755073743389,0.975267478179181,5.11798328225697,5.28250733783777,6.82499557039929,4.10075752665767,1.13008116620243,3.30819206127675,5.97095077717098,7.0152141640602,2.31510213706675,0,4.66693867014219,1.8589409885985,1.40847801266121,2.58140433967293,7.17217999395784,3.21003946333125,1.41904425628239,2.32218398827431,0.658589785919804,0,1.39973888097993,1.63577591633371,2.68120910214315,0,2.44773882019626,1.29151611801369,1.68471475667626,1.7737206141467,3.90529780351831,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,2.59453182862662,2.68107518185313,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,2.27308917445131,0,1.48482340416319,0,1.9882952955326,0.703347082052564,0.890469640183247,0,0,8.96615947129814,2.76283915531148,0,11.4540924402413,0,32.6591567044898,2.51631383212515,0,2.55786185113436,3.35387579165574,0,7.77958931012458,1.93866549219044,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0.964771509003264,1.52581736317083,1.10579259931225,0.295547618953547,0.438770794307945,0,0,3.23191085715948,8.65959624437209,0,0,0,0.638002319463839,3.66390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0.619202951523374,0,0,0,0,0.741412462787447,5.61804353109152,0.937057782901357,0,0.19566461893209,0,1.18375320854817,1.20990716048664,6.73360075587078,1.76922422959766,0,0.103688191397247,0.664653872707185,0.992975867626496,0,0,0,0.138674673013139,0,0.489961987071888,1.91530254476886,4.01871336956669,9.28724575346729,0,0,0,4.55848377495571,0,8.13530666809917,7.94843162951155,1.78843150532691,0.126621591911757,0,5.85159387836196,4.69596588426576,7.59276516412095,0,0,0,0,0,0,0,0,0.611989305817931,3.75635766871975,2.40168115483916,0,0,3.0083580899397,0,8.37847203816763,4.81236890424536,0.717873024576814,0.199679000498991,0.429226048136571,0.446342914883745,2.35142153703542,54.7655822984453,0,0,0,0,0,0,3.18091875923721,0.408610218334727,0,1.2378549293751,2.07720169014593,0.449947783103001,0,0.0607495566580247,0,0.945668487590378,2.6751839948849,0.950403028674658,0.179287339332845,3.45447355175002,2.1440859791201,1.98627591109629,0,2.71499800876856,0.864221491201268,3.5924609612035,5.98650957812437,0,25.5582032678133,0,0.146552233678082,1.32506888912221,6.20558190535443,1.05786081394152,0,1.40963004463334,1.60181118851542,2.67247318669432,3.31391244277756,1.48849806543585,0,0,7.021753835472,0,0,0,0,0,0.886068179966986,0.366078794705889,1.001527445652,8.027728739661,2.21858103073705,1.17983165588629,0,2.24964734331792,0,0.285465333544967,2.11739237728355,0,0,6.86572093279621,4.44055288709727,3.88364103051829,8.14432922682883,3.27038272278348,2.66943366478961,2.97492088916001,2.26846385644859,6.68379962505956,2.36568239983414,6.05327715222069,5.39763734596325,5.58946644754534,11.1970676117031,13.5579274424577,19.8263123488459,10.3677750208081,9.13932509205109,9.35802686370722,10.5472222337484,8.05579177818663,11.1368102370838,25.87623276541,2.00013882331577,12.0188496813978,10.1024846629776,7.57109389371906,0,0,1.04397716786085,10.2017666480523,6.01958433241968,1.46842022703881,0.895444205407437,4.94082315457555,12.718474875565,1.41351316756705,0.38582807654183,0.675769762612291,0,0.690860683462397,3.3424595179512,0.967809053062115,0,0,0,1.63804924423206,0.983091635014877,0.633936370075881,9.99936979274649,0,2.92765465423387,1.70254786070051,7.91655586082915,0.279759015438889,1.86623178009892,2.55788742607303,0,2.83078695340614,0,0,3.61377364172861,0.123935764259002,0,28.3023872081543,0,0,11.9909820854833,26.6433565297284,0.513833800771676,1.41696576325585,1.27707087245721,0.82046545696302,4.78936222821264,0.207471757392654,0.484426936895553,1.42769420259154,0.294443155503077,0,3.4851433719119,2.4260389891571,20.2132510597599,2.0710797781803,2.18807844327902,3.38446477571658,19.1619815268344,0.781514011233092,0,0.327543835020193,0,0.0675375846183947,2.34323429584154,1.03343398250592,0.253663240775627,11.4864709893826,1.09651553371436,6.45074531906083,0.351742488719241,0.511049710558381,0,0,0.606965604236632,0.91064876540519,4.25771376780666,0.115233987555779,10.1177925568077,0.40781839786099,0.197318320688547,0,9.0097435532576,2.11931350696388,0.942693539496011,0,4.56579360254748,1.07963795609311,0,1.85839014859306,0,0,0.173858272302579,3.20684545892101,4.97318793991288,3.0729325876911,0,0,3.4316280211864,3.91981661892125,3.81048345171836,1.8328549483524,1.5510319283216,2.8666168169323,0,0,0,1.94228651156368,1.33461648913121,4.6392577253528,2.91426595835484,0,0,0,0,0,0,0.848915739187391,3.93407208907123,0,4.16752146981639,0,19.2382297772646,5.64388160621463,8.453114551668,19.0318368450355,0.375935671919414,0.515663103788617,0,1.2498775702396,1.41157948686277,0,0.730336388246517,1.37618785021362,1.43339583151451,0.157771562193185,0.135982980381829,3.05445483238264,5.81929524566941,4.46394021800102,1.38652688589425,11.6809171773423,0,0,2.91406552326305,0,0,0,0,6.82008283964155,2.94760543171796,0,1.13776295448085,3.41174371041569,1.90451545170992,0.129177819672012,0.372448285775147,8.85841714386846,0.12729431655633,0.808468755832877,1.30630048738177,2.05339980651169,0.26940821205835,1.36272190246085,4.9899053481902,3.5003405502719,0,3.8614456457388,0,21.1176848163109,6.35655509750906,5.2896503181046,0.665756774185513,2.61655931668334,0 | |||
|short_description=p3@INHBA | |||
}} |
Revision as of 16:42, 22 January 2014
Short description: | p3@INHBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_INHBA_5end |
Coexpression cluster: | C1986_Preadipocyte_Mesenchymal_basal_Fibroblast_Ewing_hepatic_Adipocyte |
Association with transcript: | 0bp_to_ENST00000442711, uc003thq.2_5end |
EntrezGene: | INHBA |
HGNC: | 6066 |
UniProt: | P08476 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.79e-16 | 76 |
muscle precursor cell | 1.27e-07 | 58 |
myoblast | 1.27e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-07 | 58 |
preadipocyte | 3.67e-07 | 12 |
smooth muscle cell | 4.40e-07 | 43 |
smooth muscle myoblast | 4.40e-07 | 43 |
muscle cell | 4.51e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.28e-08 | 83 |
dense mesenchyme tissue | 2.87e-08 | 73 |
surface structure | 3.09e-08 | 99 |
somite | 3.22e-08 | 71 |
presomitic mesoderm | 3.22e-08 | 71 |
presumptive segmental plate | 3.22e-08 | 71 |
dermomyotome | 3.22e-08 | 71 |
trunk paraxial mesoderm | 3.22e-08 | 71 |
skeletal muscle tissue | 3.39e-08 | 62 |
striated muscle tissue | 3.39e-08 | 62 |
myotome | 3.39e-08 | 62 |
muscle tissue | 4.70e-08 | 64 |
musculature | 4.70e-08 | 64 |
musculature of body | 4.70e-08 | 64 |
paraxial mesoderm | 7.22e-08 | 72 |
presumptive paraxial mesoderm | 7.22e-08 | 72 |
epithelial vesicle | 9.57e-08 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.47e-07 | 14 |