FFCP PHASE1:Hg19::chr7:83823951..83823960,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |||
|TSSclassifier=not | |||
|UniProt=Q14563 | |||
|association_with_transcript=256bp_to_ENST00000265362,NM_006080,uc003uhz.2_5end | |||
|description=CAGE_peak_13_at_SEMA3A_5end | |||
|id=chr7:83823951..83823960,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.05e-08;1!CL:1000600;2.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.84e-08,1;CL:1000600,2.84e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.84e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3111;7.00e-09;1!DOID:3371;7.00e-09;1!DOID:4549;7.00e-09;1!DOID:5861;7.00e-09;1!DOID:6496;7.00e-09;1!DOID:3603;7.00e-09;1!DOID:3119;2.06e-08;14!DOID:3905;9.79e-08;9!DOID:299;4.33e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.98e-11,106;DOID:0050687,6.70e-10,143;DOID:3111,6.50e-09,1;DOID:3603,6.50e-09,1;DOID:3371,7.56e-09,1;DOID:4549,7.56e-09,1;DOID:5861,7.56e-09,1;DOID:6496,7.56e-09,1;DOID:3119,1.68e-08,14;DOID:3905,7.08e-08,9;DOID:299,4.08e-07,25;DOID:3908,9.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000481!7.47e-11!347;UBERON:0000033!2.75e-09!123;UBERON:0000153!3.84e-08!129;UBERON:0007811!3.84e-08!129;UBERON:0005743!1.12e-07!86;UBERON:0000064!1.28e-07!219;UBERON:0003056!1.62e-07!61;UBERON:0005409!1.64e-07!35;UBERON:0000160!1.97e-07!27;UBERON:0000073!1.98e-07!94;UBERON:0001016!1.98e-07!94;UBERON:0000475!2.01e-07!365;UBERON:0001017!6.13e-07!82;UBERON:0002780!7.18e-07!41;UBERON:0001890!7.18e-07!41;UBERON:0006240!7.18e-07!41;UBERON:0000955!9.26e-07!69;UBERON:0006238!9.26e-07!69;UBERON:0000119!9.49e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.73e-15;2!UBERON:0002114;2.16e-10;2!UBERON:0004645;2.05e-08;1!UBERON:0004913;2.05e-08;1!UBERON:0003703;2.05e-08;1!UBERON:0001256;2.05e-08;1!UBERON:0001259;2.05e-08;1!UBERON:0001174;2.05e-08;1!UBERON:0004914;2.05e-08;1!UBERON:0003296;3.47e-08;4!UBERON:0010133;3.47e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.56e-15,2;UBERON:0002114,1.87e-10,2;UBERON:0004913,1.10e-08,1;UBERON:0003703,1.10e-08,1;UBERON:0001174,1.10e-08,1;UBERON:0004914,1.10e-08,1;UBERON:0004645,2.84e-08,1;UBERON:0001256,2.84e-08,1;UBERON:0001259,2.84e-08,1;UBERON:0003296,3.29e-08,4;UBERON:0010133,3.29e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.627713197974014,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0.486634870302636,1.13441780596881,0,0.43917392846563,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.860509862246441,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0.352303495931295,0,0.421352420106746,0.61246251376468,0.368502951935304,0.103325781175765,1.18800285728205,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.184099797284599,0,0,0.302256294682921,0,0.193260853163297,0.545492241181669,0,0,0.530119073285941,0.116193942869518,0.414644220061482,0,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.514703430895577,0,0,0,0.277765335475589,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0,0,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.616838775210622,0,0.164254312027618,1.03850885836724,0.232420756919918,0.846016147141356,0.200506470303285,0,0.34444334449382,0.182091168006717,0,0,0.539107359730903,0,0,0.527758144464379,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.638063562472921,0,0,0.94443704049192,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0.318203247925937,0,0.719489830333259,0.823611089208164,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0.545999645631943,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0,0,0.430234056612155,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67482869622324,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0.251932747854276,0.20453736500431,0.123084805461069,0,0.718946809178615,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0.910347586283997,1.27126825146383,0,0.344743373241465,0,0.173624994933292,0,0.482385754501632,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.782658475728359,3.64170569301139,0,0,0.30607276163049,0.252746318513952,0.150323419414493,0.103688191397247,0,1.65495977937749,0,0,0,1.66409607615766,0.520679215005393,0.391969589657511,1.21882889212564,0,0,0.19351266257817,0.146178634172371,0.164230914106418,0.193978032976839,3.00070830751101,0,0.137041924646751,0,0.253243183823515,0.195551382734803,0,0,0.39961921916426,0,1.60351234632282,0,0,0.372757606696298,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.295282444544246,0.338693328263138,0,0,0.964518890790115,0.687697182986169,0,0,0,0.0607495566580247,0,0,0,1.79520572082991,0.537862017998534,0,0,0,0.25426853765475,0,0.864221491201268,0.326587360109409,0,0,0,0.226624183040251,0,0,0.387848869084652,0,0,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.244052529803926,0.1251909307065,0,0.443716206147409,0.18628920882415,0.968440444553616,0.624902039810533,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0.457680136793847,0.151230923763239,0.310874401165561,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.245772908753719,3.80361822045529,0,0,0.172214979660816,0,0,0.279759015438889,0,0,0.215649622793364,0,0,0,0.212574920101683,0,0,0,0.315446980005013,0,0.352675943690684,0.6124909547064,0.192687675289379,2.8339315265117,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0,0.577628330751691,0,0,0.397832444232549,0,0,0,0,0.655087670040387,1.77427303460454,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,1.14986184875636,0,0.672567444437648,1.21393120847326,2.27662191351298,0,0.230467975111559,0,0.883606528698812,0.0657727735628491,0,0.889851215136553,0.078493092850514,0.628462359664008,0.560544326627578,0,0.21592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| |||
|short_description=p13@SEMA3A | |||
}} |
Revision as of 17:40, 22 January 2014
Short description: | p13@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SEMA3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 256bp_to_ENST00000265362, NM_006080, uc003uhz.2_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | Q14563 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.84e-08 | 1 |
lower urinary tract cell | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.56e-15 | 2 |
duodenum | 1.87e-10 | 2 |
hepatopancreatic ampulla | 1.10e-08 | 1 |
extrahepatic bile duct | 1.10e-08 | 1 |
common bile duct | 1.10e-08 | 1 |
duodenal papilla | 1.10e-08 | 1 |
urinary bladder urothelium | 2.84e-08 | 1 |
wall of urinary bladder | 2.84e-08 | 1 |
mucosa of urinary bladder | 2.84e-08 | 1 |
gland of diencephalon | 3.29e-08 | 4 |
neuroendocrine gland | 3.29e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.98e-11 | 106 |
cell type cancer | 6.70e-10 | 143 |
cystadenocarcinoma | 6.50e-09 | 1 |
mucinous cystadenocarcinoma | 6.50e-09 | 1 |
chondrosarcoma | 7.56e-09 | 1 |
extraosseous chondrosarcoma | 7.56e-09 | 1 |
myxoid chondrosarcoma | 7.56e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 7.56e-09 | 1 |
gastrointestinal system cancer | 1.68e-08 | 14 |
lung carcinoma | 7.08e-08 | 9 |
adenocarcinoma | 4.08e-07 | 25 |
non-small cell lung carcinoma | 9.70e-07 | 5 |