FFCP PHASE1:Hg19::chr8:41435998..41436060,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137964 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20880 | |||
|TSSclassifier=strong | |||
|UniProt=E5RGW3 | |||
|association_with_transcript=64bp_to_ENST00000520223_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_AGPAT6_5end | |||
|id=chr8:41435998..41436060,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.65e-09!42;CL:0000860!5.19e-08!45;CL:0000766!1.16e-07!76;CL:0000055!3.47e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.47e-10;8!CL:0000081;3.88e-09;11!CL:0002393;8.54e-08;6!CL:0002397;8.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.61e-10,8;CL:0000766,9.79e-10,72;CL:0000081,3.14e-09,11;CL:0000763,8.64e-07,108;CL:0000049,8.64e-07,108;CL:0000860,8.65e-07,42;CL:0002057,8.65e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.43e-10!167;UBERON:0004765!1.07e-07!101;UBERON:0001434!1.07e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.27e-08;20!UBERON:0002619;2.24e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.08e-09,20;UBERON:0004765,2.24e-08,90;UBERON:0001434,5.62e-08,100;UBERON:0002619,5.90e-08,22;UBERON:0002204,7.06e-08,167;UBERON:0002371,2.05e-07,76 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,1.34088328328186,0,0,0.631719873426831,0,0.245733936501509,0,0.655324116390517,0.263766978228454,1.98026164736075,2.31978163009541,0,1.20538905604795,0,1.95173119516203,0.61560529038394,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0.152826811495903,0.0821005894499457,0.157421562627358,1.57345710739562,0,1.23852898652861,0,0.30120591877825,0.739508020333575,0.697204805222715,0,0,11.0799081706375,9.42558903109666,15.1907609501096,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,0,0.863077176966451,1.7931249457037,1.6553756092201,0.344745680736619,0.645484683583826,2.70852973188684,0.188242339542605,0.272906150057846,0.674170453335254,2.14258724659632,1.28371610830437,3.19668562899521,0.659702600373432,0.598390972864896,0,2.61188314765726,1.70215567407342,1.24564449799115,1.00499466102697,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0.632924774881769,0.633765858935825,3.82687739937078,2.30624510059213,0.898629049171961,0.750884464207532,1.28580469357664,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,2.64342657158052,1.68152568894461,0.263384084775077,0,0.393010762749165,0,0,0.32592226663359,0,0,0.222820913770347,0,0.443067789167242,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0.950452044448374,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.579386075843295,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.851363990735132,0.728590576585084,0.370784442784429,1.62273696827342,0.174129737299267,0.26591592103773,0.715471872916026,0.571994910780128,0,0,0,0.347140501607594,1.13061588384802,0,0,0,0.516833518338658,1.77883131343355,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0,0,0,0,17.1314542666882,23.2668158488995,0.436094052142534,0.496971951695318,0.633152558322899,0.926864265692532,0.860509862246441,2.12801029319014,0,1.06748995729705,0.49333509683432,0.311211035399766,0.404132016209064,0.326923806226917,0.908144565869588,0,0.468642863667593,1.24864030732128,0,1.34503812496621,0.23486899728753,0.971237666208789,0.140450806702248,1.02077085627447,0.737005903870608,1.44656093646072,1.18800285728205,0.247266929278557,0,0,1.17835279767846,0.750711119231785,0.831192346452549,0.438977620880838,0,0.45071417671979,0.113432183160021,0.538168907066586,0,0.211931901159562,0.600182192168805,0.618315175430633,0,1.48893485065272,1.18143432568886,0.389748020644795,0.757301322732344,0.276149695926898,0.969876340912871,0,0.302256294682921,0.169560592310488,0.773043412653187,1.36373060295417,0,0.365921118388786,0.265059536642971,0.348581828608555,0.10366105501537,0,0.36497735907583,0,0,1.38134921352481,0.928735856063958,1.44375896333917,0.591534000199219,0.337169380156203,0.482022059766964,0.110293972732394,0.653638332277218,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0,1.20725313949488,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,1.13420077793909,0.0895585227028483,0,1.15014803749563,0,0.264145302039678,5.80518723514162,0.576479813667846,3.53478813593864,4.31785681186749,4.58386110669933,10.5495702489042,0,1.02827492703324,1.8020583470635,5.43070221998099,0.672786506072164,0,0.4400297149257,0.517086863031111,3.57656445851882,0,0.531876233169741,1.04007436911366,0.257207374262142,1.41849132023278,0.266422179016099,0.714889968290738,0,0.823240336780769,0.65147236858747,0.355391948742546,0,0.602878754119172,0,0.499864955910285,0,0.502257091432126,0,0.239624855491583,2.29723871668228,0,0.868687840005475,0.410952645100767,0.716243852959582,0.224170287987055,0.788123040807709,1.50939302401662,0.77005821767849,0.508189248444927,0,0,0,0.637938751653163,9.73709131131337,5.9832291840805,12.4324654030811,1.10422342547226,1.00034104211935,0.271265023699736,0.623912584592421,0.356857977594324,0.315404830067869,0.585707074963566,1.20378439891088,2.27407504055985,1.03473071292505,1.32845119707087,0.184369168541703,0.521301686808497,0.783204629850962,1.02943027143257,2.27444828735176,5.60856922128404,1.70764092485511,0,0,0.907170879989041,0,0.920771839728375,0,1.02511319404561,0.511707249066704,0.804269605718038,0,0.616838775210622,0.177561725313127,0.98552587216571,0,1.04589340613963,0.241718899183244,0.601519410909855,0.460404944679482,0.114814448164607,0,0.786746489756545,0,0.308061348417659,0,0,0.527758144464379,0,0.170093705276516,0,1.54227252690289,0,1.00337954770971,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0.457847324091717,0.247528499761764,0.574265537996172,0.650060246036521,0,0.580024309752732,0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| |||
|short_description=p4@AGPAT6 | |||
}} |
Revision as of 21:49, 22 January 2014
Short description: | p4@AGPAT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AGPAT6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 64bp_to_ENST00000520223_5end |
EntrezGene: | AGPAT6 |
HGNC: | 20880 |
UniProt: | E5RGW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.61e-10 | 8 |
myeloid leukocyte | 9.79e-10 | 72 |
blood cell | 3.14e-09 | 11 |
myeloid cell | 8.64e-07 | 108 |
common myeloid progenitor | 8.64e-07 | 108 |
classical monocyte | 8.65e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.65e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.08e-09 | 20 |
skeletal element | 2.24e-08 | 90 |
skeletal system | 5.62e-08 | 100 |
regional part of cerebral cortex | 5.90e-08 | 22 |
musculoskeletal system | 7.06e-08 | 167 |
bone marrow | 2.05e-07 | 76 |