FFCP PHASE1:Hg19::chr8:139926319..139926328,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=169044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22989 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-70bp_to_ENST00000484387_5end | |||
|coexpression_cluster_id=C2919 | |||
|description=CAGE_peak_4_at_COL22A1_5end | |||
|id=chr8:139926319..139926328,- | |||
|ontology_enrichment_celltype=CL:0000221!3.47e-12!71;CL:0000128!1.22e-09!7;CL:0000126!1.22e-09!7;CL:0000127!1.22e-09!7;CL:0002453!1.22e-09!7;CL:0000133!2.53e-09!59;CL:0002319!1.83e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.42e-09;2!CL:0002596;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,6.42e-09,2;CL:0000047,1.37e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.78e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.78e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004733!4.49e-10!12;UBERON:0002028!4.49e-10!12;UBERON:0007277!4.49e-10!12;UBERON:0003076!1.86e-09!15;UBERON:0003057!1.86e-09!15;UBERON:0004732!3.77e-09!13;UBERON:0002680!1.18e-08!9;UBERON:0001895!1.18e-08!9;UBERON:0010092!1.18e-08!9;UBERON:0002037!8.58e-08!6;UBERON:0006215!8.58e-08!6;UBERON:0000924!1.85e-07!173;UBERON:0006601!1.85e-07!173;UBERON:0000922!2.15e-07!612;UBERON:0004121!2.95e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;3.92e-32;2!UBERON:0003296;1.31e-16;4!UBERON:0010133;1.31e-16;4!UBERON:0001894;6.69e-10;7!UBERON:0005396;6.42e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.92e-32,2;UBERON:0003296,1.31e-16,4;UBERON:0010133,1.31e-16,4;UBERON:0001894,6.69e-10,7;UBERON:0006222,6.69e-10,7;UBERON:0005396,6.42e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.738726348460727,0.408001382488506,0.313454721478088,0,0.684372125364421,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.232387885739037,0.518305275076852,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.185176890317059,0,0,0,0.34779121492523,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,1.27587750330633,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0.246381468041427,0.519254429183621,0,0,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0,0,1.25924938732256,0,0,0,0,0,0.143124886741991,0,0,0,0,0,1.27281299170375,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,1.65409603063837,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.818149460017238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.331737779793674,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,0,0,0,0.157363764404994,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.496771223531068,0,0,0.151649117541648,0.285465333544967,0,0,0.869526171664951,0,0,0,0,0,0,0,0.453692771289717,0.777186002913902,0.147855149989634,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0.215649622793364,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0.879356221798103,0,0,0,3.64179362541979,7.05752793189023,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.647782773655864,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0.935757853848423,1.79055697645231,0,0,0.109940516745429,0,0,0.218559560503957,6.58444214906132,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0.275684698604535,0.250707539292375,0,0,0,0,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p4@COL22A1 | |||
}} |
Revision as of 00:09, 23 January 2014
Short description: | p4@COL22A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL22A1_5end |
Coexpression cluster: | C2919_smallcell_Smooth_skeletal_small_Urothelial_pituitary_gastrointestinal |
Association with transcript: | -70bp_to_ENST00000484387_5end |
EntrezGene: | COL22A1 |
HGNC: | 22989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 6.42e-09 | 2 |
neuronal stem cell | 1.37e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.92e-32 | 2 |
gland of diencephalon | 1.31e-16 | 4 |
neuroendocrine gland | 1.31e-16 | 4 |
diencephalon | 6.69e-10 | 7 |
future diencephalon | 6.69e-10 | 7 |
carotid artery segment | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.78e-10 | 14 |