UBERON:0010042: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0010042 | |||
|is_a=UBERON:0009494 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=1st arch mesenchyme | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0004362 | |part_of=UBERON:0004362 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="mesenchyme of 1st arch" EXACT [EMAPA:16128] | ||
|union_of= | |||
|xref=EMAPA:16128 | |||
}} | }} |
Revision as of 11:48, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0009494(pharyngeal arch mesenchymal region) |
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part_of: | UBERON:0004362(pharyngeal arch 1) |
Children
is a: | UBERON:0010045 (1st arch maxillary mesenchyme),UBERON:0010259 (1st arch mesenchyme from neural crest) |
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part of: | UBERON:0010259 (1st arch mesenchyme from neural crest) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010042 (1st arch mesenchyme), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data