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{{UBERON
{{UBERON
|id=UBERON:0000118
|alt_id=
|name=lung bud
|namespace=
|def="Structure derived from foregut that becomes a lung." [GO:0060431, Wikipedia:Lung_buds]
|xref=BTO:0001643;;EHDAA2:0004089;;http://upload.wikimedia.org/wikipedia/commons/thumb/7/71/Gray948.png/200px-Gray948.png;;ncithesaurus:Respiratory_Diverticulum;;SCTID:361427007
|is_a=UBERON:0000077;;UBERON:0005153;;UBERON:0005911
|synonym="lung bud" RELATED PLURAL [];;"primary lung bud" RELATED [GO:0060572];;"respiratory diverticulum" RELATED [Wikipedia:Lung_buds]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Structure derived from foregut that becomes a lung." [GO:0060431, Wikipedia:Lung_buds]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0005597;;UBERON:0008947
|develops_from=UBERON:0005597;;UBERON:0008947
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0000118
|is_a=UBERON:0005153 ;;UBERON:0005911
|is_obsolete=
|located_in=
|located_in=
|name=lung bud
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="lung bud" RELATED PLURAL [];;"primary lung bud" RELATED [GO:0060572];;"respiratory diverticulum" RELATED [Wikipedia:Lung_buds]
|union_of=
|xref=BTO:0001643;;EHDAA2:0004089;;http://upload.wikimedia.org/wikipedia/commons/thumb/7/71/Gray948.png/200px-Gray948.png;;ncithesaurus:Primary_Bronchial_Bud;;ncithesaurus:Respiratory_Diverticulum;;SCTID:361427007
}}
}}

Latest revision as of 17:06, 12 September 2014

Name:lung bud
Namespace:FANTOM
Definition:"Structure derived from foregut that becomes a lung." [GO:0060431, Wikipedia:Lung_buds]
Xrefs:
links:

BTO:0001643
EHDAA2:0004089
[ 200px-Gray948.png 200px-Gray948.png]
ncithesaurus:Primary_Bronchial_Bud
ncithesaurus:Respiratory_Diverticulum

SCTID:361427007
Synonyms: "lung bud" RELATED PLURAL []
"primary lung bud" RELATED [GO:0060572]
"respiratory diverticulum" RELATED [Wikipedia:Lung_buds]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005153(epithelial bud),UBERON:0005911(endo-epithelium)
develops_from:UBERON:0005597(lung primordium),UBERON:0008947(respiratory primordium)



Children

develops from:UBERON:0002048 (lung)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000118 (lung bud), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data