UBERON:0004715: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="The ring of fibrocartilage and fibrous tissue forming the circumference of the intervertebral disc; surrounds the nucleus pulposus, which is prone to herniation when the annulus fibrosus is compromised." [BTO:0003629, Wikipedia:Annulus_fibrosus_disci_intervertebralis] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004715 | |||
|is_a=UBERON:0004120 ;;UBERON:0006444 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=annulus fibrosus disci intervertebralis | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001066 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="annulus fibrosus" BROAD [MA:0000111];;"annulus fibrosus of intervertebral disc" RELATED [BTO:0003629];;"anulus fibrosus (diskus intervertebralis)" EXACT [FMA:13551];;"anulus fibrosus of intervertebral disk" EXACT [FMA:13551];;"fibrous ring of intervertebral disc" RELATED [BTO:0003629] | ||
|union_of= | |||
|xref=BTO:0003629;;FMA:13551;;http://upload.wikimedia.org/wikipedia/commons/d/d9/Cervical_vertebra_english.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/d/d9/Cervical_vertebra_english.png/200px-Cervical_vertebra_english.png;;MA:0000111;;Wikipedia:Annulus_fibrosus_disci_intervertebralis | |||
}} | }} | ||
Latest revision as of 17:47, 12 September 2014
| Name: | annulus fibrosus disci intervertebralis | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The ring of fibrocartilage and fibrous tissue forming the circumference of the intervertebral disc; surrounds the nucleus pulposus, which is prone to herniation when the annulus fibrosus is compromised." [BTO:0003629, Wikipedia:Annulus_fibrosus_disci_intervertebralis] | ||
| Xrefs: |
| ||
| Synonyms: |
"annulus fibrosus" BROAD [MA:0000111] "annulus fibrosus of intervertebral disc" RELATED [BTO:0003629] "anulus fibrosus (diskus intervertebralis)" EXACT [FMA:13551] "anulus fibrosus of intervertebral disk" EXACT [FMA:13551] "fibrous ring of intervertebral disc" RELATED [BTO:0003629] |
Cervical_vertebra_english.png]
200px-Cervical_vertebra_english.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0006444(annulus fibrosus) |
|---|---|
| part_of: | UBERON:0001066(intervertebral disk) |
Children
| part of: | CL:0002602 (annulus pulposus cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11463-119B5 (Anulus Pulposus Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004715 (annulus fibrosus disci intervertebralis), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.68e-99 | FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_333345ed53fb4f0a81b1747d4b4647e7 | p5@PTGFR |
| 5.68e-99 | FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_333345ed53fb4f0a81b1747d4b4647e7 | p5@PTGFR |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_e1f9f2c8be02387e5badb6558d0a6c40 | p@chr13:24914614..24914622, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_e1f9f2c8be02387e5badb6558d0a6c40 | p@chr13:24914614..24914622, - |
| 2.34e-79 | FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_d0d52a064114a9888077e012de8fcafc | p@chr9:114135497..114135526, - |
| 2.34e-79 | FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_d0d52a064114a9888077e012de8fcafc | p@chr9:114135497..114135526, - |
| 1.45e-66 | FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_852493bdfed9d82fc703fc19da330256 | p@chr3:174737010..174737023, + |
| 1.45e-66 | FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_852493bdfed9d82fc703fc19da330256 | p@chr3:174737010..174737023, + |
| 2.84e-66 | FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_264841e7e27f90e6bbf70c7502a384a2 | p@chr2:241897189..241897221, - |
| 2.84e-66 | FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_264841e7e27f90e6bbf70c7502a384a2 | p@chr2:241897189..241897221, - |
| 1.13e-57 | FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_10e197d5680f5c65bb6b280d06d4e454 | p4@PAX1 |
| 1.13e-57 | FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_10e197d5680f5c65bb6b280d06d4e454 | p3@PAX1 |
| 1.13e-57 | FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_10e197d5680f5c65bb6b280d06d4e454 | p4@PAX1 |
| 1.13e-57 | FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_10e197d5680f5c65bb6b280d06d4e454 | p@chr10:81923378..81923389, - |
| 1.13e-57 | FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_10e197d5680f5c65bb6b280d06d4e454 | p3@PAX1 |
| 1.13e-57 | FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_10e197d5680f5c65bb6b280d06d4e454 | p@chr10:81923378..81923389, - |
| 1.14e-50 | FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_fceed533031de90346222bab34851f3a | p3@NKX3-2 |
| 1.14e-50 | FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_fceed533031de90346222bab34851f3a | p3@NKX3-2 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_95a85ef254985bf03a9448cac19ebfcf | p4@NKX3-2 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_95a85ef254985bf03a9448cac19ebfcf | p4@NKX3-2 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr16:4421890..4421912,-#_149209327ac6d74617d97edf6627f529 | p@chr16:4421890..4421912, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr16:4421890..4421912,-#_149209327ac6d74617d97edf6627f529 | p@chr16:4421890..4421912, - |
| 3.19e-45 | FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_f689e61695242411916fcecc37abc6cf | p@chr2:241897125..241897142, - |
| 3.19e-45 | FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_f689e61695242411916fcecc37abc6cf | p@chr2:241897125..241897142, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_aadda54c88d7d2857f318daf81cc83ac | p@chr3:80727046..80727051, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_aadda54c88d7d2857f318daf81cc83ac | p@chr3:80727046..80727051, - |
| 5.99e-41 | FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_2333cd7c05a88c9c84e102fc3fa80476 | p@chr5:30104176..30104187, - |
| 5.99e-41 | FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_2333cd7c05a88c9c84e102fc3fa80476 | p@chr5:30104176..30104187, - |
| 3.01e-40 | FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_6e6c992fad67ce1399b09e5a02c248bf | p@chr1:19778678..19778689, - |
| 3.01e-40 | FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_6e6c992fad67ce1399b09e5a02c248bf | p@chr1:19778678..19778689, - |
| 1.3e-37 | FFCP PHASE2:Hg19::chr20:21695435..21695452,+#_8d4ab8f1a59f5296b266eb3975d153f5 | p@chr20:21695435..21695452, + |
| 1.3e-37 | FFCP PHASE1:Hg19::chr20:21695435..21695452,+#_8d4ab8f1a59f5296b266eb3975d153f5 | p@chr20:21695435..21695452, + |
| 3.94e-37 | FFCP PHASE2:Hg19::chr16:70795228..70795237,+#_d7bf323642bf9e91a209b48c2fa07776 | p@chr16:70795228..70795237, + |
| 3.94e-37 | FFCP PHASE1:Hg19::chr16:70795228..70795237,+#_d7bf323642bf9e91a209b48c2fa07776 | p@chr16:70795228..70795237, + |
| 8.2e-37 | FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_b5b42383f35c81d980643f9f6b2d43b0 | p1@uc010aki.1 |
| 8.2e-37 | FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_b5b42383f35c81d980643f9f6b2d43b0 | p1@uc010aki.1 |
| 1.18e-36 | FFCP PHASE1:Hg19::chr8:27455513..27455516,+#_52394b8f6672cd8f284c7638aa5fb4d9 | p7@CU679734 |
| 1.18e-36 | FFCP PHASE2:Hg19::chr8:27455513..27455516,+#_52394b8f6672cd8f284c7638aa5fb4d9 | p7@CU679734 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_d347104c7eac1d787803b246afd6da21 | p3@uc010aki.1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_d347104c7eac1d787803b246afd6da21 | p3@uc010aki.1 |
| 8.05e-30 | FFCP PHASE2:Hg19::chr11:66724317..66724340,-#_0292605eb67fd93fbad2d5e497c0a6f6 | p@chr11:66724317..66724340, - |
| 8.05e-30 | FFCP PHASE1:Hg19::chr11:66724317..66724340,-#_0292605eb67fd93fbad2d5e497c0a6f6 | p@chr11:66724317..66724340, - |
| 2.22e-29 | FFCP PHASE2:Hg19::chr2:53161632..53161661,-#_47107708cd4e60511a6fdfa31fc014df | p@chr2:53161632..53161661, - |
| 2.22e-29 | FFCP PHASE1:Hg19::chr2:53161632..53161661,-#_47107708cd4e60511a6fdfa31fc014df | p@chr2:53161632..53161661, - |
| 5.41e-28 | FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_79dd5ce32003b37fb9c4be91c2e4f605 | p15@SNED1 |
| 5.41e-28 | FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_79dd5ce32003b37fb9c4be91c2e4f605 | p15@SNED1 |
| 7.1e-28 | FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_0123bbb366c4ea5b5ff803aecefa897c | p20@CAPZB |
| 7.1e-28 | FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_0123bbb366c4ea5b5ff803aecefa897c | p20@CAPZB |
| 2.09e-27 | FFCP PHASE2:Hg19::chr8:25337491..25337504,+#_27082e0b86db56eefdc7b02c1395082c | p@chr8:25337491..25337504, + |
| 2.09e-27 | FFCP PHASE1:Hg19::chr8:25337491..25337504,+#_27082e0b86db56eefdc7b02c1395082c | p@chr8:25337491..25337504, + |
| 3.59e-26 | FFCP PHASE2:Hg19::chr2:241897363..241897398,+#_6c23e8f7a644ef0038f60a21b871d21c | p@chr2:241897363..241897398, + |
| 3.59e-26 | FFCP PHASE1:Hg19::chr2:241897363..241897398,+#_6c23e8f7a644ef0038f60a21b871d21c | p@chr2:241897363..241897398, + |
| 3.89e-25 | FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_1c3e6d69aa892b413d8c8e96ebacecc8 | p10@SYNJ2 |
| 3.89e-25 | FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_1c3e6d69aa892b413d8c8e96ebacecc8 | p10@SYNJ2 |
| 5.58e-25 | FFCP PHASE2:Hg19::chr7:18832801..18832816,+#_ce7cfb7c988cd73564f3be2d7ad2a699 | p21@HDAC9 |
| 5.58e-25 | FFCP PHASE1:Hg19::chr7:18832801..18832816,+#_ce7cfb7c988cd73564f3be2d7ad2a699 | p21@HDAC9 |
| 1.02e-24 | FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_3e00d39d0e7268d51c3a1bba301de080 | p@chr9:16138889..16138902, - |
| 1.02e-24 | FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_3e00d39d0e7268d51c3a1bba301de080 | p@chr9:16138889..16138902, - |
| 1.45e-24 | FFCP PHASE1:Hg19::chr2:241938405..241938416,+#_d48b0ae0646f3913cf8ded983154488e | p@chr2:241938405..241938416, + |
| 1.45e-24 | FFCP PHASE2:Hg19::chr2:241938405..241938416,+#_d48b0ae0646f3913cf8ded983154488e | p@chr2:241938405..241938416, + |
| 2.34e-24 | FFCP PHASE1:Hg19::chr8:78311303..78311320,+#_a2d03fbdff24a5793f77f2e0829f5aec | p2@ENST00000518706 |
| 2.34e-24 | FFCP PHASE2:Hg19::chr8:78311303..78311320,+#_a2d03fbdff24a5793f77f2e0829f5aec | p2@ENST00000518706 |
| 6.77e-24 | FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_8d0930cf9570d0b7b1a188ceb141c097 | p1@ENST00000436845 |
| 6.77e-24 | FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_8d0930cf9570d0b7b1a188ceb141c097 | p1@ENST00000436845 |
| 8.02e-24 | FFCP PHASE2:Hg19::chr17:38655950..38655954,+#_3cc1740f16654116d7658aeb4ca6634d | p@chr17:38655950..38655954, + |
| 8.02e-24 | FFCP PHASE1:Hg19::chr17:38655950..38655954,+#_3cc1740f16654116d7658aeb4ca6634d | p@chr17:38655950..38655954, + |
| 1.13e-23 | FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_9c0883e03259d40cfcc6aa067871cf2c | p6@SIX4 |
| 1.13e-23 | FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_9c0883e03259d40cfcc6aa067871cf2c | p6@SIX4 |
| 1.78e-23 | FFCP PHASE2:Hg19::chr1:78695298..78695311,+#_879616fa48ca04e4815550e380b6fbf1 | p1@ENST00000413519 |
| 1.78e-23 | FFCP PHASE1:Hg19::chr1:78695298..78695311,+#_879616fa48ca04e4815550e380b6fbf1 | p1@ENST00000413519 |
| 1.14e-21 | FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_4351b2f2a1caa0da1a15414b35275476 | p6@CCDC86 |
| 1.14e-21 | FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_4351b2f2a1caa0da1a15414b35275476 | p6@CCDC86 |
| 1.53e-21 | FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_353a64790a786512601676efc29516f1 | p19@HDAC9 |
| 1.53e-21 | FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_353a64790a786512601676efc29516f1 | p19@HDAC9 |
| 3.47e-21 | FFCP PHASE2:Hg19::chr20:30181389..30181408,+#_c49b3932bea6fd2027936d70ffe6689c | p@chr20:30181389..30181408, + |
| 3.47e-21 | FFCP PHASE1:Hg19::chr20:30181389..30181408,+#_c49b3932bea6fd2027936d70ffe6689c | p@chr20:30181389..30181408, + |
| 3.81e-21 | FFCP PHASE2:Hg19::chr3:158384350..158384362,-#_f25666c976a61758b0969e91c1e5104f | p@chr3:158384350..158384362, - |
| 3.81e-21 | FFCP PHASE1:Hg19::chr3:158384350..158384362,-#_f25666c976a61758b0969e91c1e5104f | p@chr3:158384350..158384362, - |
| 4.66e-21 | FFCP PHASE1:Hg19::chr18:12012068..12012098,+#_63b0a931f86a9b8b6762f75c145c24dc | p@chr18:12012068..12012098, + |
| 4.66e-21 | FFCP PHASE2:Hg19::chr18:12012068..12012098,+#_63b0a931f86a9b8b6762f75c145c24dc | p@chr18:12012068..12012098, + |
| 5.2e-21 | FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_524322f6067db0eca272fb8abc482a98 | p@chr7:158224707..158224729, - |
| 5.2e-21 | FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_524322f6067db0eca272fb8abc482a98 | p@chr7:158224707..158224729, - |
| 6.96e-21 | FFCP PHASE2:Hg19::chr2:158345440..158345449,-#_d4822a5754313c8c6911788d317429fd | p9@CYTIP |
| 6.96e-21 | FFCP PHASE1:Hg19::chr2:158345440..158345449,-#_d4822a5754313c8c6911788d317429fd | p9@CYTIP |
| 6.96e-21 | FFCP PHASE2:Hg19::chr11:108743668..108743675,+#_d4822a5754313c8c6911788d317429fd | p@chr11:108743668..108743675, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr11:108743668..108743675,+#_d4822a5754313c8c6911788d317429fd | p@chr11:108743668..108743675, + |
| 8.49e-21 | FFCP PHASE1:Hg19::chr6:158490395..158490407,+#_f0723edc7fe2b38c1da995402ef64cb1 | p9@SYNJ2 |
| 8.49e-21 | FFCP PHASE2:Hg19::chr6:158490395..158490407,+#_f0723edc7fe2b38c1da995402ef64cb1 | p9@SYNJ2 |
| 2.74e-20 | FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_4d92b337139f00bb3868f2443d7628c1 | p@chr1:65888177..65888194, + |
| 2.74e-20 | FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_4d92b337139f00bb3868f2443d7628c1 | p@chr1:65888177..65888194, + |
| 1.64e-19 | FFCP PHASE2:Hg19::chr19:14223369..14223385,-#_cd0c272e696021e8e02254770220161a | p5@PRKACA |
| 1.64e-19 | FFCP PHASE1:Hg19::chr19:14223369..14223385,-#_cd0c272e696021e8e02254770220161a | p5@PRKACA |
| 2.38e-19 | FFCP PHASE2:Hg19::chr9:113798560..113798572,-#_af45d57e44a258eaf1469fde787641b9 | p34@LPAR1 |
| 2.38e-19 | FFCP PHASE1:Hg19::chr9:113798560..113798572,-#_af45d57e44a258eaf1469fde787641b9 | p34@LPAR1 |
| 4.53e-19 | FFCP PHASE1:Hg19::chr17:73688878..73688882,+#_7141412376b0e54d11e5239c5f272bf5 | p@chr17:73688878..73688882, + |
| 4.53e-19 | FFCP PHASE2:Hg19::chr17:73688878..73688882,+#_7141412376b0e54d11e5239c5f272bf5 | p@chr17:73688878..73688882, + |
| 6.53e-19 | FFCP PHASE1:Hg19::chr3:58572689..58572703,-#_a20e88b220b4e1aa57948cee9553dea2 | p6@FAM107A |
| 6.53e-19 | FFCP PHASE2:Hg19::chr3:58572689..58572703,-#_a20e88b220b4e1aa57948cee9553dea2 | p6@FAM107A |
| 7.03e-19 | FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_8783b72ac87583cae0c54c5355489343 | p1@MGC27382 |
| 7.03e-19 | FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_8783b72ac87583cae0c54c5355489343 | p1@MGC27382 |
