UBERON:0004819: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="An epithelium that is part of a kidney [Obol]." [OBOL:automatic] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004819 | |||
|is_a=UBERON:0000483 ;;UBERON:0006554 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=kidney epithelium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002113 | |part_of=UBERON:0002113 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="epithelial tissue of kidney" EXACT [OBOL:automatic];;"epithelium of kidney" EXACT [OBOL:automatic];;"kidney epithelial tissue" EXACT [OBOL:automatic] | ||
|union_of= | |||
|xref=BTO:0000059;;MA:0002846 | |||
}} | }} | ||
Latest revision as of 17:48, 12 September 2014
| Name: | kidney epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelium that is part of a kidney [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"epithelial tissue of kidney" EXACT [OBOL:automatic] "epithelium of kidney" EXACT [OBOL:automatic] "kidney epithelial tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000483(epithelium),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| is a: | UBERON:0004211 (nephron epithelium),UBERON:0005103 (mesonephric epithelium),UBERON:0007684 (uriniferous tubule),UBERON:0009201 (nephric duct),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11597-120H4 (Renal Epithelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004819 (kidney epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2c | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2c | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4 | p4@PAX2 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4 | p4@PAX2 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0c | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0c | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p4@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958876..101958883,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:101958876..101958883, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:36016859..36016897, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597725..89597743,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:89597725..89597743, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p11@Wars |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr7:151927980..151927988, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:20817297..20817313, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@ENSMUST00000152401 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:20419453..20419476, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr2:160573108..160573123, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr6:83487114..83487124, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p5@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378968..21378988,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21378968..21378988, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379125..21379144, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:52712765..52712772, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p5@Eddm3b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:66513886..66513897,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:66513886..66513897, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p6@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr14:63611214..63611229, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:31379486..31379501, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:19141429..19141440, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25349488..25349492,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p6@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:75798097..75798101, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p3@Gm6040, p3@LOC100503992 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:160347529..160347538, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:43367743..43367754, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:160347529..160347538, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:96150839..96150842, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr6:147624258..147624285, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:34107562..34107572, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr18:46301295..46301302, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378766..21378781,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21378766..21378781, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr5:31379845..31379855, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@Wfdc11 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75347689..75347703,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr15:75347689..75347703, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr3:103650758..103650778, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379306..21379315, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21380670..21380678, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p1@9230113P08Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr7:148445639..148445665, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141482..19141496,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:19141482..19141496, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr15:75329148..75329155, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr16:25752228..25752237, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90368977..90368987,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:90368977..90368987, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:25706249..25706254, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:6204391..6204398,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@Gm6792 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:101958887..101958896, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@Defb23 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr7:56772735..56772741, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379261..21379264, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p4@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35252614..35252635,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p3@Ly6g5b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:101959282..101959299, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:65253465..65253475,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr3:65253465..65253475, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:90155722..90155743, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:22547027..22547063,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr16:22547027..22547063, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p7@Spink10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr2:25677632..25677636, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:155698166..155698174, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:50280181..50280192, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651764..35651782,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p2@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr2:164434346..164434353, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:59845376..59845393,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:74784728..74784738,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr18:74784728..74784738, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr14:51680551..51680555, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379118..21379120,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr13:21379118..21379120, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87936213..87936218,+#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chr1:87936213..87936218, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_0eb222a7b0b4ea34ae56f51e3d641a5b | p@chrX:130496166..130496188, - |
