UBERON:0004211

Name:	nephron epithelium
Namespace:	FANTOM
Definition:	"The nephron epithelium is a tissue that covers the surface of a nephron" [GO:0072088]
Synonyms:	"epithelial tissue of nephron" EXACT [OBOL:automatic] "epithelium of nephron" EXACT [OBOL:automatic] "nephron epithelial tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	UBERON:0004819(kidney epithelium)
part_of:	UBERON:0001285(nephron)

Children

is a:	UBERON:0001231 (nephron tubule),UBERON:0004810 (nephron tubule epithelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

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Human (Homo sapiens)

• 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
• 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
• 11517-119H5 (Renal Epithelial Cells, donor1)
• 11518-119H6 (Renal Mesangial Cells, donor1)
• 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
• 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
• 11597-120H4 (Renal Epithelial Cells, donor2)
• 11598-120H5 (Renal Mesangial Cells, donor2)
• 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
• 11677-122H3

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004211 (nephron epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
1.05e-87	FFCP PHASE2:Hg19::chr2:693380..693398,+	p@chr2:693380..693398, +
1.05e-87	FFCP PHASE1:Hg19::chr2:693380..693398,+	p@chr2:693380..693398, +
1.72e-83	FFCP PHASE1:Hg19::chr15:66420804..66420837,-	p4@MEGF11
1.72e-83	FFCP PHASE2:Hg19::chr15:66420804..66420837,-	p4@MEGF11
2.2e-74	FFCP PHASE1:Hg19::chr7:27219833..27219845,-	p7@HOXA10
2.2e-74	FFCP PHASE2:Hg19::chr7:27219833..27219845,-	p7@HOXA10
7.63e-66	FFCP PHASE2:Hg19::chr1:1100457..1100470,+	p@chr1:1100457..1100470, +
7.63e-66	FFCP PHASE1:Hg19::chr1:1100457..1100470,+	p@chr1:1100457..1100470, +
6.44e-62	FFCP PHASE2:Hg19::chr10:102495147..102495159,+	p4@PAX2
6.44e-62	FFCP PHASE1:Hg19::chr10:102495147..102495159,+	p4@PAX2
5.84e-60	FFCP PHASE2:Hg19::chr18:3456189..3456200,+	p@chr18:3456189..3456200, +
5.84e-60	FFCP PHASE1:Hg19::chr18:3456189..3456200,+	p@chr18:3456189..3456200, +
6.18e-60	FFCP PHASE2:Hg19::chr10:102505954..102505973,+	p3@PAX2
6.18e-60	FFCP PHASE1:Hg19::chr10:102505954..102505973,+	p3@PAX2
4.45e-59	FFCP PHASE2:Hg19::chr20:6034607..6034616,-	p6@LRRN4
4.45e-59	FFCP PHASE1:Hg19::chr20:6034607..6034616,-	p6@LRRN4
3.49e-58	FFCP PHASE2:Hg19::chr5:74244100..74244117,+	p@chr5:74244100..74244117, +
3.49e-58	FFCP PHASE1:Hg19::chr5:74244100..74244117,+	p@chr5:74244100..74244117, +
3.91e-56	FFCP PHASE1:Hg19::chr20:6033532..6033548,-	p2@AB527789
3.91e-56	FFCP PHASE2:Hg19::chr20:6033532..6033548,-	p2@AB527789
3.83e-55	FFCP PHASE1:Hg19::chr16:86604624..86604648,+	p@chr16:86604624..86604648, +
3.83e-55	FFCP PHASE2:Hg19::chr16:86604624..86604648,+	p@chr16:86604624..86604648, +
3.51e-54	FFCP PHASE1:Hg19::chr16:86768403..86768437,+	p@chr16:86768403..86768437, +
3.51e-54	FFCP PHASE2:Hg19::chr16:86768403..86768437,+	p@chr16:86768403..86768437, +
6.09e-53	FFCP PHASE1:Hg19::chr16:3068288..3068312,-	p2@CLDN6
6.09e-53	FFCP PHASE2:Hg19::chr16:3068288..3068312,-	p2@CLDN6
2.79e-52	FFCP PHASE1:Hg19::chr1:81001398..81001426,+	p1@ENST00000418041, p1@ENST00000443104
2.79e-52	FFCP PHASE2:Hg19::chr1:81001398..81001426,+	p1@ENST00000418041, p1@ENST00000443104
1.61e-50	FFCP PHASE1:Hg19::chr7:7606139..7606151,-	p@chr7:7606139..7606151, -
1.61e-50	FFCP PHASE2:Hg19::chr7:7606139..7606151,-	p@chr7:7606139..7606151, -
1.96e-50	FFCP PHASE1:Hg19::chr17:36104873..36104903,-	p3@HNF1B
1.96e-50	FFCP PHASE2:Hg19::chr17:36104873..36104903,-	p3@HNF1B
1.73e-49	FFCP PHASE2:Hg19::chr7:140227349..140227360,-	p@chr7:140227349..140227360, -
1.73e-49	FFCP PHASE1:Hg19::chr7:140227349..140227360,-	p@chr7:140227349..140227360, -
2.61e-49	FFCP PHASE1:Hg19::chr7:27219754..27219759,-	p16@HOXA10
2.61e-49	FFCP PHASE2:Hg19::chr7:27219754..27219759,-	p16@HOXA10
3.13e-49	FFCP PHASE1:Hg19::chr21:41029235..41029269,+	p2@B3GALT5
3.13e-49	FFCP PHASE2:Hg19::chr21:41029235..41029269,+	p2@B3GALT5
4.07e-49	FFCP PHASE1:Hg19::chr9:133986782..133986794,+	p4@AIF1L
4.07e-49	FFCP PHASE2:Hg19::chr9:133986782..133986794,+	p4@AIF1L
1.12e-47	FFCP PHASE2:Hg19::chr7:140227303..140227330,-	p@chr7:140227303..140227330, -
1.12e-47	FFCP PHASE1:Hg19::chr7:140227303..140227330,-	p@chr7:140227303..140227330, -
1.23e-44	FFCP PHASE1:Hg19::chr20:6034576..6034592,-	p3@LRRN4
1.23e-44	FFCP PHASE2:Hg19::chr20:6034576..6034592,-	p3@LRRN4
3.62e-44	FFCP PHASE2:Hg19::chr21:46826248..46826282,-	p@chr21:46826248..46826282, -
3.62e-44	FFCP PHASE1:Hg19::chr21:46826248..46826282,-	p@chr21:46826248..46826282, -
3.06e-43	FFCP PHASE1:Hg19::chr20:6034672..6034714,-	p2@LRRN4
3.06e-43	FFCP PHASE2:Hg19::chr20:6034672..6034714,-	p2@LRRN4
1.81e-42	FFCP PHASE1:Hg19::chr15:85403302..85403304,+	p@chr15:85403302..85403304, +
1.81e-42	FFCP PHASE2:Hg19::chr15:85403302..85403304,+	p@chr15:85403302..85403304, +
1.82e-42	FFCP PHASE1:Hg19::chr7:98453821..98453843,-	p@chr7:98453821..98453843, -
1.82e-42	FFCP PHASE2:Hg19::chr7:98453821..98453843,-	p@chr7:98453821..98453843, -
2.77e-42	FFCP PHASE1:Hg19::chr20:6034598..6034603,-	p7@LRRN4
2.77e-42	FFCP PHASE2:Hg19::chr20:6034598..6034603,-	p7@LRRN4
7.5e-42	FFCP PHASE2:Hg19::chr10:102505493..102505546,+	p2@PAX2
7.5e-42	FFCP PHASE1:Hg19::chr10:102505493..102505546,+	p2@PAX2
3.59e-41	FFCP PHASE2:Hg19::chr9:71735910..71735923,+	p16@TJP2
3.59e-41	FFCP PHASE1:Hg19::chr9:71735910..71735923,+	p16@TJP2
9.39e-41	FFCP PHASE1:Hg19::chr1:94713418..94713436,+	p1@ENST00000413103
9.39e-41	FFCP PHASE2:Hg19::chr1:94713418..94713436,+	p1@ENST00000413103
1.7e-40	FFCP PHASE1:Hg19::chr20:6034828..6034857,-	p5@LRRN4
1.7e-40	FFCP PHASE2:Hg19::chr20:6034828..6034857,-	p5@LRRN4
2.9e-40	FFCP PHASE1:Hg19::chr1:20465872..20465881,+	p2@PLA2G2F
2.9e-40	FFCP PHASE2:Hg19::chr1:20465872..20465881,+	p2@PLA2G2F
8.58e-40	FFCP PHASE1:Hg19::chr9:133986807..133986821,+	p3@AIF1L
8.58e-40	FFCP PHASE2:Hg19::chr9:133986807..133986821,+	p3@AIF1L
1.21e-39	FFCP PHASE2:Hg19::chr2:31361432..31361442,-	p6@GALNT14
1.21e-39	FFCP PHASE1:Hg19::chr2:31361432..31361442,-	p6@GALNT14
3.08e-39	FFCP PHASE1:Hg19::chr20:6033120..6033128,-	p4@AB527789
3.08e-39	FFCP PHASE2:Hg19::chr20:6033120..6033128,-	p4@AB527789
7.42e-37	FFCP PHASE2:Hg19::chr6:24358114..24358125,-	p4@DCDC2
7.42e-37	FFCP PHASE1:Hg19::chr6:24358114..24358125,-	p4@DCDC2
1.29e-36	FFCP PHASE2:Hg19::chr2:693362..693373,+	p@chr2:693362..693373, +
1.29e-36	FFCP PHASE1:Hg19::chr2:693362..693373,+	p@chr2:693362..693373, +
1.36e-36	FFCP PHASE2:Hg19::chr2:177016336..177016350,+	p1@HOXD4
1.36e-36	FFCP PHASE1:Hg19::chr2:177016336..177016350,+	p1@HOXD4
6.21e-36	FFCP PHASE2:Hg19::chr2:176982078..176982095,+	p@chr2:176982078..176982095, +
6.21e-36	FFCP PHASE1:Hg19::chr2:176982078..176982095,+	p@chr2:176982078..176982095, +
2.64e-35	FFCP PHASE2:Hg19::chr20:6033140..6033181,-	p1@AB527789
2.64e-35	FFCP PHASE1:Hg19::chr20:6033140..6033181,-	p1@AB527789
3.85e-35	FFCP PHASE2:Hg19::chr2:108994466..108994485,+	p3@SULT1C4
3.85e-35	FFCP PHASE1:Hg19::chr2:108994466..108994485,+	p3@SULT1C4
8.14e-35	FFCP PHASE1:Hg19::chr18:43405633..43405645,+	p4@SIGLEC15
8.14e-35	FFCP PHASE2:Hg19::chr18:43405633..43405645,+	p4@SIGLEC15
1.65e-34	FFCP PHASE1:Hg19::chr10:91043420..91043437,+	p1@ENST00000444849
1.65e-34	FFCP PHASE2:Hg19::chr10:91043420..91043437,+	p1@ENST00000444849
1.14e-33	FFCP PHASE1:Hg19::chr17:171147..171161,+	p@chr17:171147..171161, +
1.14e-33	FFCP PHASE2:Hg19::chr17:171147..171161,+	p@chr17:171147..171161, +
1.52e-33	FFCP PHASE1:Hg19::chr14:57960456..57960478,-	p2@C14orf105
1.52e-33	FFCP PHASE2:Hg19::chr14:57960456..57960478,-	p2@C14orf105
1.8e-33	FFCP PHASE1:Hg19::chr2:31361543..31361564,-	p5@GALNT14
1.8e-33	FFCP PHASE2:Hg19::chr2:31361543..31361564,-	p5@GALNT14
2.35e-33	FFCP PHASE1:Hg19::chr3:190105935..190105966,+	p1@CLDN16
2.35e-33	FFCP PHASE2:Hg19::chr3:190105935..190105966,+	p1@CLDN16
4.12e-33	FFCP PHASE1:Hg19::chr17:36065029..36065045,-	p@chr17:36065029..36065045, -
4.12e-33	FFCP PHASE2:Hg19::chr17:36065029..36065045,-	p@chr17:36065029..36065045, -
8.12e-33	FFCP PHASE1:Hg19::chr17:35293950..35293973,-	p1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387
8.12e-33	FFCP PHASE2:Hg19::chr17:35293950..35293973,-	p1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387
1.25e-32	FFCP PHASE1:Hg19::chr22:30653574..30653606,-	p@chr22:30653574..30653606, -
1.25e-32	FFCP PHASE2:Hg19::chr22:30653574..30653606,-	p@chr22:30653574..30653606, -

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